Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AHCYP3-201ENST00000420053 1279 ntBASIC25.34■■□□□ 1.65
CUX2O14529 XBP1P1-201ENST00000436573 652 ntBASIC25.34■■□□□ 1.65
CUX2O14529 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC25.34■■□□□ 1.65
CUX2O14529 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC25.34■■□□□ 1.65
CUX2O14529 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC25.34■■□□□ 1.65
CUX2O14529 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC25.34■■□□□ 1.65
CUX2O14529 HERC2P11-201ENST00000562845 725 ntBASIC25.34■■□□□ 1.65
CUX2O14529 AC100756.2-201ENST00000569537 736 ntBASIC25.34■■□□□ 1.65
CUX2O14529 AC007250.1-201ENST00000608934 338 ntBASIC25.34■■□□□ 1.65
CUX2O14529 AC006986.1-201ENST00000612764 241 ntBASIC25.34■■□□□ 1.65
CUX2O14529 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
CUX2O14529 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC25.33■■□□□ 1.65
CUX2O14529 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC25.33■■□□□ 1.65
CUX2O14529 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
CUX2O14529 PRORSD1P-202ENST00000563365 2154 ntBASIC25.33■■□□□ 1.65
CUX2O14529 AC011840.2-201ENST00000563063 1520 ntBASIC25.33■■□□□ 1.65
CUX2O14529 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
CUX2O14529 BPIFB5P-201ENST00000457066 1099 ntBASIC25.33■■□□□ 1.65
CUX2O14529 RN7SL173P-201ENST00000461853 292 ntBASIC25.33■■□□□ 1.65
CUX2O14529 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC25.33■■□□□ 1.65
CUX2O14529 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC25.33■■□□□ 1.65
CUX2O14529 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC25.33■■□□□ 1.65
CUX2O14529 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
CUX2O14529 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CUX2O14529 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC25.32■■□□□ 1.64
CUX2O14529 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CUX2O14529 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CUX2O14529 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CUX2O14529 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC25.32■■□□□ 1.64
CUX2O14529 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
CUX2O14529 TMBIM7P-202ENST00000641474 1516 ntBASIC25.32■■□□□ 1.64
CUX2O14529 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CUX2O14529 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC25.32■■□□□ 1.64
CUX2O14529 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CUX2O14529 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
CUX2O14529 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
CUX2O14529 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CUX2O14529 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
CUX2O14529 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC25.32■■□□□ 1.64
CUX2O14529 AC008972.2-201ENST00000606587 494 ntBASIC25.32■■□□□ 1.64
CUX2O14529 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC25.32■■□□□ 1.64
CUX2O14529 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CUX2O14529 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC25.32■■□□□ 1.64
CUX2O14529 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC25.32■■□□□ 1.64
CUX2O14529 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CUX2O14529 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC25.32■■□□□ 1.64
CUX2O14529 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CUX2O14529 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC25.31■■□□□ 1.64
CUX2O14529 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC25.31■■□□□ 1.64
CUX2O14529 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
CUX2O14529 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUX2O14529 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC25.31■■□□□ 1.64
CUX2O14529 AC144522.1-201ENST00000625111 1658 ntBASIC25.31■■□□□ 1.64
CUX2O14529 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUX2O14529 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CUX2O14529 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC25.31■■□□□ 1.64
CUX2O14529 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CUX2O14529 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUX2O14529 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUX2O14529 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUX2O14529 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC25.31■■□□□ 1.64
CUX2O14529 SOD2-205ENST00000444946 917 ntTSL 2 BASIC25.31■■□□□ 1.64
CUX2O14529 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC25.31■■□□□ 1.64
CUX2O14529 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC25.31■■□□□ 1.64
CUX2O14529 LINC02447-202ENST00000501888 2146 ntBASIC25.31■■□□□ 1.64
CUX2O14529 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC25.31■■□□□ 1.64
CUX2O14529 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC25.31■■□□□ 1.64
CUX2O14529 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC25.31■■□□□ 1.64
CUX2O14529 GOLGA2P7-209ENST00000560408 745 ntBASIC25.31■■□□□ 1.64
CUX2O14529 AC120498.5-201ENST00000561757 299 ntBASIC25.31■■□□□ 1.64
CUX2O14529 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC25.31■■□□□ 1.64
CUX2O14529 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC25.31■■□□□ 1.64
CUX2O14529 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC25.31■■□□□ 1.64
CUX2O14529 AP000769.1-203ENST00000637245 208 ntBASIC25.31■■□□□ 1.64
CUX2O14529 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUX2O14529 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUX2O14529 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
CUX2O14529 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUX2O14529 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CUX2O14529 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUX2O14529 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC25.31■■□□□ 1.64
CUX2O14529 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CUX2O14529 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC25.31■■□□□ 1.64
CUX2O14529 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CUX2O14529 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
CUX2O14529 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CUX2O14529 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CUX2O14529 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CUX2O14529 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
CUX2O14529 RN7SKP230-201ENST00000365642 335 ntBASIC25.3■■□□□ 1.64
CUX2O14529 BAX-205ENST00000391871 687 ntTSL 5 BASIC25.3■■□□□ 1.64
CUX2O14529 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CUX2O14529 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC25.3■■□□□ 1.64
CUX2O14529 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC25.3■■□□□ 1.64
CUX2O14529 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CUX2O14529 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC25.3■■□□□ 1.64
CUX2O14529 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC25.3■■□□□ 1.64
CUX2O14529 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
CUX2O14529 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CUX2O14529 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms