Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 AL354718.3-201ENST00000616414 581 ntBASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 CR382287.1-201ENST00000623954 586 ntBASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 AC091951.1-201ENST00000512854 2465 ntBASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 AC107918.4-201ENST00000641966 3141 ntBASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 C8orf49-201ENST00000525043 1968 ntBASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 AL137784.3-201ENST00000623858 2288 ntBASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TMX2-CTNND1H3BSU7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 AC092933.1-201ENST00000393644 945 ntBASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 REXO1L1P-202ENST00000608646 1974 ntBASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TMX2-CTNND1H3BSU7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 REXO1L8P-201ENST00000604378 1897 ntBASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.04■□□□□ -0
TMX2-CTNND1H3BSU7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms