Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.09□□□□□ -0.31
TMEM235A6NFC5 FAM58CP-201ENST00000435741 640 ntBASIC13.09□□□□□ -0.31
TMEM235A6NFC5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 AC079140.1-201ENST00000508039 487 ntBASIC13.09□□□□□ -0.31
TMEM235A6NFC5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 AC092902.6-201ENST00000641783 218 ntBASIC13.09□□□□□ -0.31
TMEM235A6NFC5 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 AC107918.4-201ENST00000641966 3141 ntBASIC13.09□□□□□ -0.31
TMEM235A6NFC5 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 HLA-A-201ENST00000376802 1334 ntBASIC13.09□□□□□ -0.31
TMEM235A6NFC5 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.08□□□□□ -0.31
TMEM235A6NFC5 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.31
TMEM235A6NFC5 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.31
TMEM235A6NFC5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TMEM235A6NFC5 UXT-AS1-201ENST00000590504 1525 ntBASIC13.08□□□□□ -0.31
TMEM235A6NFC5 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
TMEM235A6NFC5 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TMEM235A6NFC5 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
TMEM235A6NFC5 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TMEM235A6NFC5 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TMEM235A6NFC5 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
TMEM235A6NFC5 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.08□□□□□ -0.31
TMEM235A6NFC5 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 TARDBPP1-201ENST00000442013 1203 ntBASIC13.08□□□□□ -0.32
TMEM235A6NFC5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 KRT8P48-201ENST00000515599 1220 ntBASIC13.08□□□□□ -0.32
TMEM235A6NFC5 SLC25A39P2-201ENST00000537614 270 ntBASIC13.08□□□□□ -0.32
TMEM235A6NFC5 KRT8P23-201ENST00000560090 1207 ntBASIC13.08□□□□□ -0.32
TMEM235A6NFC5 RARRES2P9-201ENST00000565168 469 ntBASIC13.08□□□□□ -0.32
TMEM235A6NFC5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms