Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 AC106820.3-201ENST00000561653 397 ntBASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 DUX4L47-201ENST00000566374 394 ntBASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 AC138466.3-201ENST00000619983 221 ntBASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 AC018735.1-201ENST00000437208 1502 ntBASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3BA6NDS4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 AC004466.1-201ENST00000599515 1080 ntBASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 AC090616.6-203ENST00000579186 1945 ntBASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 FKBP4P6-201ENST00000457486 1332 ntBASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3BA6NDS4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 HIST2H2BB-201ENST00000449108 381 ntBASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 AC005077.2-201ENST00000449786 690 ntBASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 IGHJ2P-201ENST00000454480 60 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms