Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RNMTL1P1-201ENST00000454103 560 ntBASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 RPS2P36-201ENST00000456516 831 ntBASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 AC024681.1-201ENST00000521917 487 ntBASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 AC134698.3-201ENST00000523880 214 ntBASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 MIR3907-201ENST00000579424 151 ntBASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 AL136295.7-201ENST00000619226 1200 ntBASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 AC128714.1-201ENST00000637035 887 ntBASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 AL805961.1-203ENST00000641078 1258 ntBASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 AC004923.1-202ENST00000642106 209 ntBASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 FKBP4P6-201ENST00000457486 1332 ntBASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 HLA-K-203ENST00000430151 1046 ntBASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 NUP210P1-202ENST00000504322 710 ntBASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 AL161670.2-201ENST00000557650 1227 ntBASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 AL136301.1-201ENST00000615830 422 ntBASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 AP000593.2-201ENST00000542775 1433 ntBASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC187A0A096LP49 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 AC112504.1-201ENST00000623415 1841 ntBASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 AC104457.1-201ENST00000401024 814 ntBASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms