Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 KRT18P3-201ENST00000451602 1288 ntBASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 AC069335.1-201ENST00000489972 472 ntBASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 BANF1P1-201ENST00000553684 263 ntBASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 AL592309.1-201ENST00000443127 649 ntBASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 AC009078.2-202ENST00000463353 338 ntBASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 AC140113.2-201ENST00000604370 208 ntBASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
UBE2D4Q9Y2X8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms