Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 AC044849.1-201ENST00000519737 1188 ntBASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 AC013355.1-201ENST00000562625 723 ntBASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 AC100757.4-201ENST00000626934 759 ntBASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 AC004923.1-202ENST00000642106 209 ntBASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SYNPO2Q9UMS6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.33■□□□□ 0.37
SYNPO2Q9UMS6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYNPO2Q9UMS6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SYNPO2Q9UMS6 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SYNPO2Q9UMS6 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 NKAIN1P1-201ENST00000435754 582 ntBASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 AC005740.2-201ENST00000511085 419 ntBASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNPO2Q9UMS6 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 PPT1-215ENST00000641471 2368 ntBASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 E2F3P2-201ENST00000447755 1422 ntBASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 ACE3P-201ENST00000423435 1973 ntBASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 MARK2P5-201ENST00000507649 634 ntBASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 NDUFV2P1-201ENST00000596415 907 ntBASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.32■□□□□ 0.36
SYNPO2Q9UMS6 AL136295.7-201ENST00000619226 1200 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms