Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 CICP24-201ENST00000605464 2705 ntBASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 HCG11-201ENST00000411553 5696 ntBASIC20.24■□□□□ 0.83
NPC1L1Q9UHC9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 AC103988.2-201ENST00000561804 725 ntBASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 AC009955.4-201ENST00000597192 544 ntBASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 AC092135.3-201ENST00000624151 1846 ntBASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 AC018529.2-202ENST00000611482 3087 ntBASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 MRPL37P1-201ENST00000592451 1337 ntBASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPC1L1Q9UHC9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 KRT8P4-201ENST00000509735 1454 ntBASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 AL354702.1-201ENST00000442006 1960 ntBASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1L1Q9UHC9 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 TISP43-201ENST00000409793 538 ntTSL 4 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 AL354877.1-201ENST00000424412 413 ntBASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms