Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
HACD3Q9P035 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.5■□□□□ 0.07
HACD3Q9P035 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.5■□□□□ 0.07
HACD3Q9P035 WASH3P-207ENST00000560956 1394 ntBASIC15.5■□□□□ 0.07
HACD3Q9P035 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 MROH4P-201ENST00000431302 1578 ntBASIC15.5■□□□□ 0.07
HACD3Q9P035 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.5■□□□□ 0.07
HACD3Q9P035 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.5■□□□□ 0.07
HACD3Q9P035 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.5■□□□□ 0.07
HACD3Q9P035 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.5■□□□□ 0.07
HACD3Q9P035 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HACD3Q9P035 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.5■□□□□ 0.07
HACD3Q9P035 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.5■□□□□ 0.07
HACD3Q9P035 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.5■□□□□ 0.07
HACD3Q9P035 AC004066.1-201ENST00000502488 802 ntBASIC15.5■□□□□ 0.07
HACD3Q9P035 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.5■□□□□ 0.07
HACD3Q9P035 AC123567.1-201ENST00000548294 1261 ntBASIC15.5■□□□□ 0.07
HACD3Q9P035 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.5■□□□□ 0.07
HACD3Q9P035 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.5■□□□□ 0.07
HACD3Q9P035 AC092364.2-202ENST00000597012 1073 ntBASIC15.5■□□□□ 0.07
HACD3Q9P035 AC093813.1-201ENST00000605066 256 ntBASIC15.5■□□□□ 0.07
HACD3Q9P035 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.5■□□□□ 0.07
HACD3Q9P035 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HACD3Q9P035 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.5■□□□□ 0.07
HACD3Q9P035 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HACD3Q9P035 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.5■□□□□ 0.07
HACD3Q9P035 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.5■□□□□ 0.07
HACD3Q9P035 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HACD3Q9P035 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
HACD3Q9P035 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HACD3Q9P035 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HACD3Q9P035 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.49■□□□□ 0.07
HACD3Q9P035 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
HACD3Q9P035 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.49■□□□□ 0.07
HACD3Q9P035 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HACD3Q9P035 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HACD3Q9P035 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HACD3Q9P035 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HACD3Q9P035 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.49■□□□□ 0.07
HACD3Q9P035 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.49■□□□□ 0.07
HACD3Q9P035 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 AC134915.1-201ENST00000426461 574 ntBASIC15.49■□□□□ 0.07
HACD3Q9P035 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.49■□□□□ 0.07
HACD3Q9P035 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.49■□□□□ 0.07
HACD3Q9P035 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.49■□□□□ 0.07
HACD3Q9P035 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.49■□□□□ 0.07
HACD3Q9P035 TMEM261P1-201ENST00000604899 340 ntBASIC15.49■□□□□ 0.07
HACD3Q9P035 AL662799.1-202ENST00000614205 422 ntBASIC15.49■□□□□ 0.07
HACD3Q9P035 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HACD3Q9P035 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.49■□□□□ 0.07
HACD3Q9P035 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.49■□□□□ 0.07
HACD3Q9P035 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.49■□□□□ 0.07
HACD3Q9P035 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HACD3Q9P035 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.49■□□□□ 0.07
HACD3Q9P035 CICP11-201ENST00000434745 2827 ntBASIC15.49■□□□□ 0.07
HACD3Q9P035 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HACD3Q9P035 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HACD3Q9P035 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HACD3Q9P035 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms