Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 TMBIM7P-203ENST00000641617 1718 ntBASIC13.1□□□□□ -0.31
GCM1Q9NP62 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
GCM1Q9NP62 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GCM1Q9NP62 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 RN7SL752P-201ENST00000463779 287 ntBASIC13.09□□□□□ -0.31
GCM1Q9NP62 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.09□□□□□ -0.31
GCM1Q9NP62 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 AC005225.4-201ENST00000557330 545 ntBASIC13.09□□□□□ -0.31
GCM1Q9NP62 AL359711.2-201ENST00000563105 872 ntBASIC13.09□□□□□ -0.31
GCM1Q9NP62 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 AC120045.2-201ENST00000567334 178 ntBASIC13.09□□□□□ -0.31
GCM1Q9NP62 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.09□□□□□ -0.31
GCM1Q9NP62 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GCM1Q9NP62 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
GCM1Q9NP62 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.08□□□□□ -0.31
GCM1Q9NP62 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
GCM1Q9NP62 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
GCM1Q9NP62 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.08□□□□□ -0.31
GCM1Q9NP62 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
GCM1Q9NP62 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
GCM1Q9NP62 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
GCM1Q9NP62 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.08□□□□□ -0.31
GCM1Q9NP62 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.08□□□□□ -0.31
GCM1Q9NP62 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
GCM1Q9NP62 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
GCM1Q9NP62 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.08□□□□□ -0.31
GCM1Q9NP62 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GCM1Q9NP62 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
GCM1Q9NP62 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GCM1Q9NP62 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GCM1Q9NP62 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GCM1Q9NP62 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GCM1Q9NP62 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
GCM1Q9NP62 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
GCM1Q9NP62 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GCM1Q9NP62 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GCM1Q9NP62 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GCM1Q9NP62 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GCM1Q9NP62 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.08□□□□□ -0.32
GCM1Q9NP62 CU639417.3-201ENST00000624240 1404 ntBASIC13.08□□□□□ -0.32
GCM1Q9NP62 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GCM1Q9NP62 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
GCM1Q9NP62 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GCM1Q9NP62 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GCM1Q9NP62 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.08□□□□□ -0.32
GCM1Q9NP62 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GCM1Q9NP62 C1QBPP1-201ENST00000400117 770 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms