Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 MIR4683-201ENST00000579659 81 ntBASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 PKD1P1-201ENST00000458669 6805 ntBASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 AC009093.2-202ENST00000620513 2079 ntBASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 AHCYP2-201ENST00000430630 1300 ntBASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 AC079178.1-201ENST00000420915 656 ntBASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 AL354877.1-201ENST00000424412 413 ntBASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KIAA1549Q9HCM3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 CICP24-201ENST00000605464 2705 ntBASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
KIAA1549Q9HCM3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KIAA1549Q9HCM3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
KIAA1549Q9HCM3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
KIAA1549Q9HCM3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KIAA1549Q9HCM3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KIAA1549Q9HCM3 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.45□□□□□ -0.26
KIAA1549Q9HCM3 GPAA1P2-201ENST00000417923 928 ntBASIC13.45□□□□□ -0.26
KIAA1549Q9HCM3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.45□□□□□ -0.26
KIAA1549Q9HCM3 AL591846.1-201ENST00000451736 433 ntBASIC13.45□□□□□ -0.26
KIAA1549Q9HCM3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.45□□□□□ -0.26
KIAA1549Q9HCM3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
KIAA1549Q9HCM3 ACTG1P17-201ENST00000558391 1119 ntBASIC13.45□□□□□ -0.26
KIAA1549Q9HCM3 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.45□□□□□ -0.26
KIAA1549Q9HCM3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.45□□□□□ -0.26
KIAA1549Q9HCM3 MIR3615-201ENST00000581999 87 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms