Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 TUBBP5-203ENST00000508529 1334 ntBASIC17.79■□□□□ 0.44
EFCC1Q9HA90 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.79■□□□□ 0.44
EFCC1Q9HA90 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 IQSEC3P1-201ENST00000538799 536 ntBASIC17.79■□□□□ 0.44
EFCC1Q9HA90 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 RN7SL774P-201ENST00000577467 290 ntBASIC17.79■□□□□ 0.44
EFCC1Q9HA90 BX539320.1-201ENST00000623759 877 ntBASIC17.79■□□□□ 0.44
EFCC1Q9HA90 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFCC1Q9HA90 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 AC069218.1-201ENST00000435269 762 ntBASIC17.78■□□□□ 0.44
EFCC1Q9HA90 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 RN7SL818P-201ENST00000485099 259 ntBASIC17.78■□□□□ 0.44
EFCC1Q9HA90 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 MIR4313-201ENST00000580760 101 ntBASIC17.78■□□□□ 0.44
EFCC1Q9HA90 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 AL133499.1-201ENST00000596207 608 ntBASIC17.78■□□□□ 0.44
EFCC1Q9HA90 RN7SL725P-201ENST00000606439 259 ntBASIC17.78■□□□□ 0.44
EFCC1Q9HA90 AC026740.1-201ENST00000607068 791 ntBASIC17.78■□□□□ 0.44
EFCC1Q9HA90 HLA-C-210ENST00000640219 976 ntBASIC17.78■□□□□ 0.44
EFCC1Q9HA90 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
EFCC1Q9HA90 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 AC104784.1-201ENST00000473096 294 ntBASIC17.77■□□□□ 0.44
EFCC1Q9HA90 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 AC018635.2-201ENST00000608625 364 ntBASIC17.77■□□□□ 0.44
EFCC1Q9HA90 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFCC1Q9HA90 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms