Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 AL596325.1-201ENST00000563991 1082 ntBASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 TEX28P1-201ENST00000613479 1221 ntBASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 TEX28P2-201ENST00000617764 1221 ntBASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 AL358472.5-202ENST00000641448 1267 ntBASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 CETN4P-206ENST00000642099 2168 ntBASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
FOXP3Q9BZS1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 RPL37AP1-201ENST00000412502 279 ntBASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 SPTLC1P1-201ENST00000447199 261 ntBASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 SLED1-202ENST00000512051 380 ntBASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 BANF1P1-201ENST00000553684 263 ntBASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 RN7SL828P-201ENST00000607615 303 ntBASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 AC008738.7-201ENST00000609744 511 ntBASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 HSPA7-201ENST00000445535 1927 ntBASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXP3Q9BZS1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 AC018442.1-201ENST00000421439 2061 ntBASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 KRT8P12-202ENST00000472924 1397 ntBASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms