Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USB1Q9BQ65 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USB1Q9BQ65 FABP5-201ENST00000297258 851 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USB1Q9BQ65 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
USB1Q9BQ65 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 COX5BP8-201ENST00000416911 349 ntBASIC13.83□□□□□ -0.2
USB1Q9BQ65 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 TARDBPP1-201ENST00000442013 1203 ntBASIC13.83□□□□□ -0.2
USB1Q9BQ65 MYCLP2-201ENST00000449268 967 ntBASIC13.83□□□□□ -0.2
USB1Q9BQ65 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 RPL12P24-201ENST00000474907 486 ntBASIC13.83□□□□□ -0.2
USB1Q9BQ65 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 AC123567.1-201ENST00000548294 1261 ntBASIC13.83□□□□□ -0.2
USB1Q9BQ65 AC023310.3-201ENST00000557027 670 ntBASIC13.83□□□□□ -0.2
USB1Q9BQ65 AC100756.1-201ENST00000562736 682 ntBASIC13.83□□□□□ -0.2
USB1Q9BQ65 AL603832.2-201ENST00000566195 2125 ntBASIC13.83□□□□□ -0.2
USB1Q9BQ65 AC138749.3-201ENST00000567691 622 ntBASIC13.83□□□□□ -0.2
USB1Q9BQ65 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.83□□□□□ -0.2
USB1Q9BQ65 AC116165.1-201ENST00000611806 668 ntBASIC13.83□□□□□ -0.2
USB1Q9BQ65 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USB1Q9BQ65 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USB1Q9BQ65 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USB1Q9BQ65 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
USB1Q9BQ65 AC073869.1-201ENST00000415574 2762 ntBASIC13.83□□□□□ -0.2
USB1Q9BQ65 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 AL139385.1-201ENST00000611744 3272 ntBASIC13.82□□□□□ -0.2
USB1Q9BQ65 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 PAICSP2-201ENST00000429118 1150 ntBASIC13.82□□□□□ -0.2
USB1Q9BQ65 AL442647.2-201ENST00000429864 857 ntBASIC13.82□□□□□ -0.2
USB1Q9BQ65 RN7SL752P-201ENST00000463779 287 ntBASIC13.82□□□□□ -0.2
USB1Q9BQ65 RN7SL399P-201ENST00000471648 279 ntBASIC13.82□□□□□ -0.2
USB1Q9BQ65 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 AC020658.4-201ENST00000613987 684 ntBASIC13.82□□□□□ -0.2
USB1Q9BQ65 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.82□□□□□ -0.2
USB1Q9BQ65 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USB1Q9BQ65 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms