Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
FOXB1Q99853 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
FOXB1Q99853 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
FOXB1Q99853 AL360270.3-201ENST00000609118 1348 ntBASIC13.44□□□□□ -0.26
FOXB1Q99853 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
FOXB1Q99853 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
FOXB1Q99853 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.44□□□□□ -0.26
FOXB1Q99853 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
FOXB1Q99853 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.44□□□□□ -0.26
FOXB1Q99853 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
FOXB1Q99853 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
FOXB1Q99853 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
FOXB1Q99853 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.44□□□□□ -0.26
FOXB1Q99853 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.44□□□□□ -0.26
FOXB1Q99853 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.44□□□□□ -0.26
FOXB1Q99853 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.44□□□□□ -0.26
FOXB1Q99853 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.44□□□□□ -0.26
FOXB1Q99853 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.44□□□□□ -0.26
FOXB1Q99853 AC005252.2-201ENST00000624630 1141 ntBASIC13.44□□□□□ -0.26
FOXB1Q99853 AL358472.5-202ENST00000641448 1267 ntBASIC13.44□□□□□ -0.26
FOXB1Q99853 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
FOXB1Q99853 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.44□□□□□ -0.26
FOXB1Q99853 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
FOXB1Q99853 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.44□□□□□ -0.26
FOXB1Q99853 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.44□□□□□ -0.26
FOXB1Q99853 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXB1Q99853 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.43□□□□□ -0.26
FOXB1Q99853 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
FOXB1Q99853 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.43□□□□□ -0.26
FOXB1Q99853 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.43□□□□□ -0.26
FOXB1Q99853 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
FOXB1Q99853 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.43□□□□□ -0.26
FOXB1Q99853 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
FOXB1Q99853 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
FOXB1Q99853 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
FOXB1Q99853 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.43□□□□□ -0.26
FOXB1Q99853 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.43□□□□□ -0.26
FOXB1Q99853 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.43□□□□□ -0.26
FOXB1Q99853 RN7SL752P-201ENST00000463779 287 ntBASIC13.43□□□□□ -0.26
FOXB1Q99853 RN7SL692P-201ENST00000464677 288 ntBASIC13.43□□□□□ -0.26
FOXB1Q99853 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
FOXB1Q99853 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 AC011495.1-201ENST00000498085 584 ntBASIC13.43□□□□□ -0.26
FOXB1Q99853 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
FOXB1Q99853 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
FOXB1Q99853 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.43□□□□□ -0.26
FOXB1Q99853 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.43□□□□□ -0.26
FOXB1Q99853 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.43□□□□□ -0.26
FOXB1Q99853 AP001063.1-201ENST00000568332 529 ntBASIC13.43□□□□□ -0.26
FOXB1Q99853 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.43□□□□□ -0.26
FOXB1Q99853 AP005019.2-201ENST00000615104 511 ntBASIC13.43□□□□□ -0.26
FOXB1Q99853 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
FOXB1Q99853 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXB1Q99853 ACE3P-201ENST00000423435 1973 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms