Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP1Q96SZ6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 DUX4L45-201ENST00000566406 1057 ntBASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 REXO1L5P-201ENST00000622260 2098 ntBASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 AC023024.2-201ENST00000623561 1993 ntBASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP1Q96SZ6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 AL354989.2-201ENST00000435838 1540 ntBASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 AC026954.1-201ENST00000429771 1293 ntBASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 ECM1P1-201ENST00000604092 1279 ntBASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDK5RAP1Q96SZ6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 BNIP3P42-201ENST00000454982 569 ntBASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms