Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NLRP3Q96P20 SNORD3B-2-202ENST00000571722 791 ntBASIC18.67■□□□□ 0.58
NLRP3Q96P20 AL133499.1-201ENST00000596207 608 ntBASIC18.67■□□□□ 0.58
NLRP3Q96P20 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLRP3Q96P20 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLRP3Q96P20 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLRP3Q96P20 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
NLRP3Q96P20 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NLRP3Q96P20 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NLRP3Q96P20 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLRP3Q96P20 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLRP3Q96P20 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.67■□□□□ 0.58
NLRP3Q96P20 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLRP3Q96P20 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLRP3Q96P20 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.67■□□□□ 0.58
NLRP3Q96P20 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLRP3Q96P20 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLRP3Q96P20 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLRP3Q96P20 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLRP3Q96P20 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.67■□□□□ 0.58
NLRP3Q96P20 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLRP3Q96P20 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLRP3Q96P20 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 PCDHB19P-201ENST00000570871 2371 ntBASIC18.66■□□□□ 0.58
NLRP3Q96P20 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 RN7SKP230-201ENST00000365642 335 ntBASIC18.66■□□□□ 0.58
NLRP3Q96P20 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 AC007274.2-201ENST00000421675 662 ntBASIC18.66■□□□□ 0.58
NLRP3Q96P20 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 AC006335.1-201ENST00000445200 547 ntBASIC18.66■□□□□ 0.58
NLRP3Q96P20 FTLP1-201ENST00000449155 526 ntBASIC18.66■□□□□ 0.58
NLRP3Q96P20 EEF1DP6-201ENST00000449232 372 ntBASIC18.66■□□□□ 0.58
NLRP3Q96P20 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 AC092850.2-201ENST00000623821 2697 ntBASIC18.66■□□□□ 0.58
NLRP3Q96P20 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLRP3Q96P20 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NLRP3Q96P20 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NLRP3Q96P20 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NLRP3Q96P20 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NLRP3Q96P20 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NLRP3Q96P20 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.65■□□□□ 0.58
NLRP3Q96P20 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NLRP3Q96P20 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NLRP3Q96P20 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NLRP3Q96P20 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.65■□□□□ 0.58
NLRP3Q96P20 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
NLRP3Q96P20 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.65■□□□□ 0.58
NLRP3Q96P20 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NLRP3Q96P20 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NLRP3Q96P20 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NLRP3Q96P20 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.65■□□□□ 0.58
NLRP3Q96P20 AL596276.2-201ENST00000447525 331 ntBASIC18.65■□□□□ 0.58
NLRP3Q96P20 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.65■□□□□ 0.58
NLRP3Q96P20 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.65■□□□□ 0.58
NLRP3Q96P20 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC18.65■□□□□ 0.58
NLRP3Q96P20 RPS2P36-201ENST00000456516 831 ntBASIC18.65■□□□□ 0.58
NLRP3Q96P20 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NLRP3Q96P20 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.65■□□□□ 0.58
NLRP3Q96P20 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.65■□□□□ 0.58
NLRP3Q96P20 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
NLRP3Q96P20 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC18.65■□□□□ 0.58
NLRP3Q96P20 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NLRP3Q96P20 AC008825.2-201ENST00000603374 718 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms