Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 AC006122.1-201ENST00000493323 440 ntBASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 AC084781.1-201ENST00000613737 656 ntBASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 AC144522.1-201ENST00000625111 1658 ntBASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 AP003680.1-201ENST00000598970 3660 ntBASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 RPL5P21-201ENST00000404620 815 ntBASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 AL157407.1-201ENST00000435784 904 ntBASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 AL139008.1-201ENST00000437894 228 ntBASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 AC026410.1-201ENST00000507366 1101 ntBASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 AC087392.5-201ENST00000612517 489 ntBASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 AC092299.1-201ENST00000632679 757 ntBASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 CYP4F23P-201ENST00000593402 1579 ntBASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM43Q96BQ3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM43Q96BQ3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM43Q96BQ3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM43Q96BQ3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM43Q96BQ3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM43Q96BQ3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM43Q96BQ3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM43Q96BQ3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM43Q96BQ3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRIM43Q96BQ3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TRIM43Q96BQ3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms