Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 C1QBPP1-201ENST00000400117 770 ntBASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 BOLA2P3-201ENST00000404566 256 ntBASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 ACTG1P3-201ENST00000431775 1114 ntBASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 AL359711.2-201ENST00000563105 872 ntBASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 AC120045.2-201ENST00000567334 178 ntBASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 AL008721.1-201ENST00000609964 604 ntBASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 TMBIM7P-203ENST00000641617 1718 ntBASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SH3KBP1Q96B97 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 MIR6752-201ENST00000618442 71 ntBASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SH3KBP1Q96B97 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms