Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP1Q8TDR0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
TRAF3IP1Q8TDR0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP1Q8TDR0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP1Q8TDR0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP1Q8TDR0 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP1Q8TDR0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAF3IP1Q8TDR0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 AC000095.1-201ENST00000603208 874 ntBASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 AC006538.3-201ENST00000612495 578 ntBASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 AP000845.1-201ENST00000581677 2131 ntBASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAF3IP1Q8TDR0 AJ011931.1-201ENST00000618749 2492 ntBASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 CICP23-201ENST00000605013 2741 ntBASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 BASP1P1-201ENST00000430708 665 ntBASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 AC009407.1-201ENST00000568958 598 ntBASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 AL158212.4-201ENST00000624062 1286 ntBASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 AC106881.1-201ENST00000605849 3329 ntBASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP1Q8TDR0 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms