Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 PRSS30P-206ENST00000641773 873 ntBASIC16.17■□□□□ 0.18
UBA3Q8TBC4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.17■□□□□ 0.18
UBA3Q8TBC4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 KLF2P2-201ENST00000416807 1039 ntBASIC16.16■□□□□ 0.18
UBA3Q8TBC4 NUS1P3-201ENST00000423502 862 ntBASIC16.16■□□□□ 0.18
UBA3Q8TBC4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 AP005019.2-201ENST00000615104 511 ntBASIC16.16■□□□□ 0.18
UBA3Q8TBC4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBA3Q8TBC4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 ACE3P-201ENST00000423435 1973 ntBASIC16.15■□□□□ 0.18
UBA3Q8TBC4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 ACKR1-201ENST00000368121 1240 ntBASIC16.15■□□□□ 0.18
UBA3Q8TBC4 AL645937.2-201ENST00000396808 931 ntBASIC16.15■□□□□ 0.18
UBA3Q8TBC4 AL139094.1-201ENST00000405549 1188 ntBASIC16.15■□□□□ 0.18
UBA3Q8TBC4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 TTTY23B-201ENST00000442790 549 ntBASIC16.15■□□□□ 0.18
UBA3Q8TBC4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 AC007389.4-201ENST00000454674 793 ntBASIC16.15■□□□□ 0.18
UBA3Q8TBC4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 AC009486.1-201ENST00000569860 813 ntBASIC16.15■□□□□ 0.18
UBA3Q8TBC4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms