Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NGEFQ8N5V2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
NGEFQ8N5V2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NGEFQ8N5V2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NGEFQ8N5V2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NGEFQ8N5V2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NGEFQ8N5V2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NGEFQ8N5V2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NGEFQ8N5V2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC20.02■□□□□ 0.8
NGEFQ8N5V2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NGEFQ8N5V2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NGEFQ8N5V2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NGEFQ8N5V2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NGEFQ8N5V2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC20.02■□□□□ 0.79
NGEFQ8N5V2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NGEFQ8N5V2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.02■□□□□ 0.79
NGEFQ8N5V2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC20.02■□□□□ 0.79
NGEFQ8N5V2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC20.02■□□□□ 0.79
NGEFQ8N5V2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 ACTBP8-201ENST00000403258 1108 ntBASIC20.01■□□□□ 0.79
NGEFQ8N5V2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NGEFQ8N5V2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20■□□□□ 0.79
NGEFQ8N5V2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20■□□□□ 0.79
NGEFQ8N5V2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20■□□□□ 0.79
NGEFQ8N5V2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
NGEFQ8N5V2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20■□□□□ 0.79
NGEFQ8N5V2 KLF2P4-201ENST00000451959 1225 ntBASIC20■□□□□ 0.79
NGEFQ8N5V2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
NGEFQ8N5V2 AC022137.2-201ENST00000503482 481 ntBASIC20■□□□□ 0.79
NGEFQ8N5V2 AP001889.1-201ENST00000525414 633 ntBASIC20■□□□□ 0.79
NGEFQ8N5V2 AC068587.3-201ENST00000526613 355 ntBASIC20■□□□□ 0.79
NGEFQ8N5V2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
NGEFQ8N5V2 PTP4A1P2-201ENST00000546033 454 ntBASIC20■□□□□ 0.79
NGEFQ8N5V2 AC009486.1-201ENST00000569860 813 ntBASIC20■□□□□ 0.79
NGEFQ8N5V2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20■□□□□ 0.79
NGEFQ8N5V2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20■□□□□ 0.79
NGEFQ8N5V2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC20■□□□□ 0.79
NGEFQ8N5V2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20■□□□□ 0.79
NGEFQ8N5V2 AL022328.1-201ENST00000610050 478 ntBASIC20■□□□□ 0.79
NGEFQ8N5V2 AC005252.2-201ENST00000624630 1141 ntBASIC20■□□□□ 0.79
NGEFQ8N5V2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC20■□□□□ 0.79
NGEFQ8N5V2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
NGEFQ8N5V2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
NGEFQ8N5V2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC20■□□□□ 0.79
NGEFQ8N5V2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC20■□□□□ 0.79
NGEFQ8N5V2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC20■□□□□ 0.79
NGEFQ8N5V2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC20■□□□□ 0.79
NGEFQ8N5V2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NGEFQ8N5V2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NGEFQ8N5V2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NGEFQ8N5V2 REXO1L5P-201ENST00000622260 2098 ntBASIC19.99■□□□□ 0.79
NGEFQ8N5V2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
NGEFQ8N5V2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NGEFQ8N5V2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NGEFQ8N5V2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NGEFQ8N5V2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NGEFQ8N5V2 AL157414.3-201ENST00000624276 1954 ntBASIC19.99■□□□□ 0.79
NGEFQ8N5V2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms