Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC18.79■□□□□ 0.6
SYNE4Q8N205 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.79■□□□□ 0.6
SYNE4Q8N205 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SYNE4Q8N205 AL133499.1-201ENST00000596207 608 ntBASIC18.79■□□□□ 0.6
SYNE4Q8N205 AF254983.2-201ENST00000612331 135 ntBASIC18.79■□□□□ 0.6
SYNE4Q8N205 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNE4Q8N205 AL353726.2-201ENST00000623259 884 ntBASIC18.79■□□□□ 0.6
SYNE4Q8N205 AC002472.3-201ENST00000640124 621 ntBASIC18.79■□□□□ 0.6
SYNE4Q8N205 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNE4Q8N205 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNE4Q8N205 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SYNE4Q8N205 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNE4Q8N205 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNE4Q8N205 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNE4Q8N205 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNE4Q8N205 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SYNE4Q8N205 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNE4Q8N205 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNE4Q8N205 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNE4Q8N205 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.78■□□□□ 0.6
SYNE4Q8N205 AC012508.2-201ENST00000567613 1472 ntBASIC18.78■□□□□ 0.6
SYNE4Q8N205 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SYNE4Q8N205 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.78■□□□□ 0.6
SYNE4Q8N205 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SYNE4Q8N205 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.78■□□□□ 0.6
SYNE4Q8N205 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.78■□□□□ 0.6
SYNE4Q8N205 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.78■□□□□ 0.6
SYNE4Q8N205 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18.78■□□□□ 0.6
SYNE4Q8N205 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.78■□□□□ 0.6
SYNE4Q8N205 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SYNE4Q8N205 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.78■□□□□ 0.6
SYNE4Q8N205 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.78■□□□□ 0.6
SYNE4Q8N205 AC008132.1-202ENST00000342005 1389 ntBASIC18.78■□□□□ 0.6
SYNE4Q8N205 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.78■□□□□ 0.6
SYNE4Q8N205 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.78■□□□□ 0.6
SYNE4Q8N205 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.78■□□□□ 0.6
SYNE4Q8N205 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNE4Q8N205 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYNE4Q8N205 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 AC023024.2-201ENST00000623561 1993 ntBASIC18.77■□□□□ 0.6
SYNE4Q8N205 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNE4Q8N205 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYNE4Q8N205 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNE4Q8N205 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNE4Q8N205 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYNE4Q8N205 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNE4Q8N205 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNE4Q8N205 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 EEF1DP6-201ENST00000449232 372 ntBASIC18.77■□□□□ 0.6
SYNE4Q8N205 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 AC005740.2-201ENST00000511085 419 ntBASIC18.77■□□□□ 0.6
SYNE4Q8N205 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYNE4Q8N205 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 AC068587.8-201ENST00000641239 219 ntBASIC18.77■□□□□ 0.6
SYNE4Q8N205 AC004923.1-202ENST00000642106 209 ntBASIC18.77■□□□□ 0.6
SYNE4Q8N205 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNE4Q8N205 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNE4Q8N205 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SYNE4Q8N205 AC087481.3-201ENST00000602886 1894 ntBASIC18.77■□□□□ 0.6
SYNE4Q8N205 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
SYNE4Q8N205 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SYNE4Q8N205 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SYNE4Q8N205 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SYNE4Q8N205 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SYNE4Q8N205 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
SYNE4Q8N205 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SYNE4Q8N205 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SYNE4Q8N205 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms