Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC18.09■□□□□ 0.49
SLX4Q8IY92 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 LINC00634-202ENST00000505157 222 ntBASIC18.09■□□□□ 0.49
SLX4Q8IY92 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.09■□□□□ 0.49
SLX4Q8IY92 AC006158.1-201ENST00000610661 249 ntBASIC18.09■□□□□ 0.49
SLX4Q8IY92 AC009145.4-201ENST00000625119 1294 ntBASIC18.09■□□□□ 0.49
SLX4Q8IY92 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.09■□□□□ 0.49
SLX4Q8IY92 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.09■□□□□ 0.49
SLX4Q8IY92 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.09■□□□□ 0.49
SLX4Q8IY92 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.09■□□□□ 0.49
SLX4Q8IY92 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
SLX4Q8IY92 LINC01815-202ENST00000641468 1409 ntBASIC18.09■□□□□ 0.49
SLX4Q8IY92 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.09■□□□□ 0.49
SLX4Q8IY92 AC092850.2-201ENST00000623821 2697 ntBASIC18.09■□□□□ 0.49
SLX4Q8IY92 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SLX4Q8IY92 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.09■□□□□ 0.49
SLX4Q8IY92 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.09■□□□□ 0.49
SLX4Q8IY92 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.09■□□□□ 0.49
SLX4Q8IY92 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.09■□□□□ 0.49
SLX4Q8IY92 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC18.09■□□□□ 0.49
SLX4Q8IY92 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SLX4Q8IY92 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLX4Q8IY92 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.08■□□□□ 0.49
SLX4Q8IY92 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLX4Q8IY92 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.08■□□□□ 0.49
SLX4Q8IY92 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.08■□□□□ 0.49
SLX4Q8IY92 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLX4Q8IY92 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLX4Q8IY92 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC18.08■□□□□ 0.48
SLX4Q8IY92 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SLX4Q8IY92 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.08■□□□□ 0.48
SLX4Q8IY92 AC138466.5-201ENST00000624002 808 ntBASIC18.08■□□□□ 0.48
SLX4Q8IY92 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.08■□□□□ 0.48
SLX4Q8IY92 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SLX4Q8IY92 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.08■□□□□ 0.48
SLX4Q8IY92 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.08■□□□□ 0.48
SLX4Q8IY92 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.08■□□□□ 0.48
SLX4Q8IY92 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLX4Q8IY92 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLX4Q8IY92 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLX4Q8IY92 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.08■□□□□ 0.48
SLX4Q8IY92 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.08■□□□□ 0.48
SLX4Q8IY92 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLX4Q8IY92 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLX4Q8IY92 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLX4Q8IY92 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.07■□□□□ 0.48
SLX4Q8IY92 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLX4Q8IY92 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLX4Q8IY92 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLX4Q8IY92 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.07■□□□□ 0.48
SLX4Q8IY92 AC092638.2-201ENST00000441105 947 ntBASIC18.07■□□□□ 0.48
SLX4Q8IY92 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC18.07■□□□□ 0.48
SLX4Q8IY92 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.07■□□□□ 0.48
SLX4Q8IY92 MARK2P16-201ENST00000605714 1723 ntBASIC18.07■□□□□ 0.48
SLX4Q8IY92 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SLX4Q8IY92 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
SLX4Q8IY92 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SLX4Q8IY92 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLX4Q8IY92 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.07■□□□□ 0.48
SLX4Q8IY92 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLX4Q8IY92 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.07■□□□□ 0.48
SLX4Q8IY92 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.07■□□□□ 0.48
SLX4Q8IY92 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLX4Q8IY92 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLX4Q8IY92 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLX4Q8IY92 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLX4Q8IY92 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLX4Q8IY92 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLX4Q8IY92 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLX4Q8IY92 Z69890.1-201ENST00000382990 339 ntBASIC18.07■□□□□ 0.48
SLX4Q8IY92 AL354861.1-201ENST00000445213 355 ntBASIC18.07■□□□□ 0.48
SLX4Q8IY92 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.07■□□□□ 0.48
SLX4Q8IY92 AP000911.2-201ENST00000534330 502 ntBASIC18.07■□□□□ 0.48
SLX4Q8IY92 LINC00431-202ENST00000636375 159 ntBASIC18.07■□□□□ 0.48
SLX4Q8IY92 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SLX4Q8IY92 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLX4Q8IY92 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLX4Q8IY92 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SLX4Q8IY92 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLX4Q8IY92 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
SLX4Q8IY92 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLX4Q8IY92 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SLX4Q8IY92 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLX4Q8IY92 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLX4Q8IY92 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.06■□□□□ 0.48
SLX4Q8IY92 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLX4Q8IY92 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLX4Q8IY92 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLX4Q8IY92 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms