Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 FXNP2-201ENST00000411625 547 ntBASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 GHSR-202ENST00000427970 912 ntBASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 AC011742.3-201ENST00000439053 820 ntBASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 Z97180.1-201ENST00000445173 988 ntBASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 AC106794.1-201ENST00000506935 792 ntBASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 BNIP3P13-201ENST00000599968 566 ntBASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 ACTG1P2-201ENST00000415776 1125 ntBASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 ACTG1P11-201ENST00000425411 1125 ntBASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 AC024681.1-201ENST00000521917 487 ntBASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 FGFR3P5-201ENST00000564496 886 ntBASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 RN7SL574P-201ENST00000581512 297 ntBASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 AC026740.1-201ENST00000607068 791 ntBASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 AC100757.4-201ENST00000626934 759 ntBASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 AC008132.1-202ENST00000342005 1389 ntBASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 AL157414.3-201ENST00000624276 1954 ntBASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS3Q8IXF0 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 CICP13-201ENST00000422015 2789 ntBASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 MST1L-201ENST00000442552 2185 ntBASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS3Q8IXF0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms