Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 FTLP10-202ENST00000505798 471 ntBASIC16.24■□□□□ 0.19
RNF135Q8IUD6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 AC069224.1-201ENST00000566372 1715 ntBASIC16.24■□□□□ 0.19
RNF135Q8IUD6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF135Q8IUD6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 MIR769-201ENST00000390225 118 ntBASIC16.23■□□□□ 0.19
RNF135Q8IUD6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 AC126915.1-201ENST00000522847 1038 ntBASIC16.23■□□□□ 0.19
RNF135Q8IUD6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 AP001505.2-201ENST00000616815 443 ntBASIC16.23■□□□□ 0.19
RNF135Q8IUD6 AL353726.2-201ENST00000623259 884 ntBASIC16.23■□□□□ 0.19
RNF135Q8IUD6 AC132938.4-201ENST00000623835 848 ntBASIC16.23■□□□□ 0.19
RNF135Q8IUD6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.23■□□□□ 0.19
RNF135Q8IUD6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF135Q8IUD6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 AP001282.1-201ENST00000531301 1499 ntBASIC16.22■□□□□ 0.19
RNF135Q8IUD6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 REXO1L1P-202ENST00000608646 1974 ntBASIC16.22■□□□□ 0.19
RNF135Q8IUD6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 POM121L10P-201ENST00000436994 1285 ntBASIC16.22■□□□□ 0.19
RNF135Q8IUD6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.22■□□□□ 0.19
RNF135Q8IUD6 AC008267.1-201ENST00000474858 1069 ntBASIC16.22■□□□□ 0.19
RNF135Q8IUD6 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 AP001582.1-201ENST00000525856 295 ntBASIC16.22■□□□□ 0.19
RNF135Q8IUD6 AC145423.3-201ENST00000615987 467 ntBASIC16.22■□□□□ 0.19
RNF135Q8IUD6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF135Q8IUD6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms