Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC003101.2-201ENST00000612557 442 ntBASIC13.68□□□□□ -0.22
LRRC28Q86X40 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 MBLAC2-202ENST00000514906 1936 ntBASIC13.68□□□□□ -0.22
LRRC28Q86X40 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRRC28Q86X40 AC087386.2-201ENST00000623212 4637 ntBASIC13.68□□□□□ -0.22
LRRC28Q86X40 AC138969.2-201ENST00000532739 9932 ntBASIC13.68□□□□□ -0.22
LRRC28Q86X40 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC28Q86X40 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 MIR770-201ENST00000390219 98 ntBASIC13.67□□□□□ -0.22
LRRC28Q86X40 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 AC107890.1-201ENST00000422478 521 ntBASIC13.67□□□□□ -0.22
LRRC28Q86X40 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 AC125807.1-201ENST00000483097 614 ntBASIC13.67□□□□□ -0.22
LRRC28Q86X40 RNA5SP410-201ENST00000516285 106 ntBASIC13.67□□□□□ -0.22
LRRC28Q86X40 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 AC140878.1-201ENST00000565277 250 ntBASIC13.67□□□□□ -0.22
LRRC28Q86X40 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.67□□□□□ -0.22
LRRC28Q86X40 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC28Q86X40 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 AL359183.1-201ENST00000623796 2132 ntBASIC13.66□□□□□ -0.22
LRRC28Q86X40 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.66□□□□□ -0.22
LRRC28Q86X40 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRC28Q86X40 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.66□□□□□ -0.22
LRRC28Q86X40 HMGN1P19-201ENST00000436976 333 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms