Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.58□□□□□ -0.24
RTTNQ86VV8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RTTNQ86VV8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.58□□□□□ -0.24
RTTNQ86VV8 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.58□□□□□ -0.24
RTTNQ86VV8 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 AC234783.1-201ENST00000441761 496 ntBASIC13.57□□□□□ -0.24
RTTNQ86VV8 AC093004.1-201ENST00000508850 424 ntBASIC13.57□□□□□ -0.24
RTTNQ86VV8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 WASH4P-201ENST00000564273 1246 ntBASIC13.57□□□□□ -0.24
RTTNQ86VV8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 AL139099.5-201ENST00000635274 300 ntBASIC13.57□□□□□ -0.24
RTTNQ86VV8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RTTNQ86VV8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RTTNQ86VV8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 CLK3P2-201ENST00000427566 1453 ntBASIC13.56□□□□□ -0.24
RTTNQ86VV8 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 AP000845.1-201ENST00000581677 2131 ntBASIC13.56□□□□□ -0.24
RTTNQ86VV8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 RPL13P2-201ENST00000440687 659 ntBASIC13.56□□□□□ -0.24
RTTNQ86VV8 KRT223P-202ENST00000449164 1292 ntBASIC13.56□□□□□ -0.24
RTTNQ86VV8 AC022210.1-201ENST00000449856 793 ntBASIC13.56□□□□□ -0.24
RTTNQ86VV8 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 AC140912.1-201ENST00000577171 1054 ntBASIC13.56□□□□□ -0.24
RTTNQ86VV8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RTTNQ86VV8 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.56□□□□□ -0.24
RTTNQ86VV8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RTTNQ86VV8 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms