Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.12■□□□□ 0.49
CTR9Q6PD62 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTR9Q6PD62 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.12■□□□□ 0.49
CTR9Q6PD62 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.12■□□□□ 0.49
CTR9Q6PD62 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CTR9Q6PD62 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTR9Q6PD62 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 AC126365.1-201ENST00000578585 1514 ntBASIC18.11■□□□□ 0.49
CTR9Q6PD62 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTR9Q6PD62 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTR9Q6PD62 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTR9Q6PD62 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTR9Q6PD62 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTR9Q6PD62 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTR9Q6PD62 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTR9Q6PD62 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTR9Q6PD62 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTR9Q6PD62 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTR9Q6PD62 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTR9Q6PD62 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.1■□□□□ 0.49
CTR9Q6PD62 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTR9Q6PD62 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.1■□□□□ 0.49
CTR9Q6PD62 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTR9Q6PD62 RNA5SP486-201ENST00000515961 83 ntBASIC18.1■□□□□ 0.49
CTR9Q6PD62 AC022616.1-201ENST00000518688 554 ntBASIC18.1■□□□□ 0.49
CTR9Q6PD62 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTR9Q6PD62 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.1■□□□□ 0.49
CTR9Q6PD62 DUX4L47-201ENST00000566374 394 ntBASIC18.1■□□□□ 0.49
CTR9Q6PD62 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTR9Q6PD62 AL033527.4-201ENST00000641026 673 ntBASIC18.1■□□□□ 0.49
CTR9Q6PD62 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTR9Q6PD62 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.1■□□□□ 0.49
CTR9Q6PD62 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.1■□□□□ 0.49
CTR9Q6PD62 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTR9Q6PD62 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 AC012508.2-201ENST00000567613 1472 ntBASIC18.09■□□□□ 0.49
CTR9Q6PD62 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 AL583810.1-201ENST00000553344 1045 ntBASIC18.09■□□□□ 0.49
CTR9Q6PD62 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 RN7SL48P-201ENST00000579283 293 ntBASIC18.09■□□□□ 0.49
CTR9Q6PD62 AP000845.1-201ENST00000581677 2131 ntBASIC18.09■□□□□ 0.49
CTR9Q6PD62 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 ECM1P1-201ENST00000604092 1279 ntBASIC18.09■□□□□ 0.49
CTR9Q6PD62 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTR9Q6PD62 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.09■□□□□ 0.49
CTR9Q6PD62 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTR9Q6PD62 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms