Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 AC073150.1-201ENST00000450406 1084 ntBASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 RN7SL181P-201ENST00000462921 277 ntBASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 HLA-J-204ENST00000495278 958 ntBASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 POU5F1P2-201ENST00000521750 823 ntBASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 AC132192.2-201ENST00000596206 1147 ntBASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 AC011491.1-203ENST00000637688 543 ntBASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 AL008718.2-201ENST00000609206 1313 ntBASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 INE2-201ENST00000630399 1874 ntBASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 TBC1D3J-201ENST00000620719 1426 ntBASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.82□□□□□ -0.04
LYSMD4Q5XG99 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 MST1L-201ENST00000442552 2185 ntBASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 AL137783.1-201ENST00000623494 1896 ntBASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 VDAC1P1-201ENST00000439229 848 ntBASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 AC008825.2-201ENST00000603374 718 ntBASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 RN7SL736P-201ENST00000613111 269 ntBASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LYSMD4Q5XG99 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms