Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 REXO1L2P-201ENST00000425429 2069 ntBASIC13.48□□□□□ -0.25
SEC61A1P61619 CICP20-201ENST00000443330 2801 ntBASIC13.48□□□□□ -0.25
SEC61A1P61619 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SEC61A1P61619 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SEC61A1P61619 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.48□□□□□ -0.25
SEC61A1P61619 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 RPL37AP1-201ENST00000412502 279 ntBASIC13.48□□□□□ -0.25
SEC61A1P61619 TSSK5P-201ENST00000423978 907 ntBASIC13.48□□□□□ -0.25
SEC61A1P61619 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SEC61A1P61619 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.48□□□□□ -0.25
SEC61A1P61619 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.48□□□□□ -0.25
SEC61A1P61619 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.48□□□□□ -0.25
SEC61A1P61619 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.48□□□□□ -0.25
SEC61A1P61619 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.48□□□□□ -0.25
SEC61A1P61619 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.48□□□□□ -0.25
SEC61A1P61619 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SEC61A1P61619 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.48□□□□□ -0.25
SEC61A1P61619 AC087386.2-201ENST00000623212 4637 ntBASIC13.48□□□□□ -0.25
SEC61A1P61619 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.48□□□□□ -0.25
SEC61A1P61619 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SEC61A1P61619 CETN4P-206ENST00000642099 2168 ntBASIC13.48□□□□□ -0.25
SEC61A1P61619 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SEC61A1P61619 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.48□□□□□ -0.25
SEC61A1P61619 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.48□□□□□ -0.25
SEC61A1P61619 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SEC61A1P61619 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.48□□□□□ -0.25
SEC61A1P61619 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.47□□□□□ -0.25
SEC61A1P61619 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.47□□□□□ -0.25
SEC61A1P61619 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SEC61A1P61619 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.47□□□□□ -0.25
SEC61A1P61619 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SEC61A1P61619 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.47□□□□□ -0.25
SEC61A1P61619 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.47□□□□□ -0.25
SEC61A1P61619 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.47□□□□□ -0.25
SEC61A1P61619 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 AC236430.1-201ENST00000402231 743 ntBASIC13.47□□□□□ -0.25
SEC61A1P61619 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.47□□□□□ -0.25
SEC61A1P61619 AC004890.2-204ENST00000481968 304 ntBASIC13.47□□□□□ -0.25
SEC61A1P61619 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.47□□□□□ -0.25
SEC61A1P61619 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SEC61A1P61619 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.47□□□□□ -0.25
SEC61A1P61619 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.47□□□□□ -0.25
SEC61A1P61619 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.47□□□□□ -0.25
SEC61A1P61619 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.47□□□□□ -0.25
SEC61A1P61619 TEX28P1-201ENST00000613479 1221 ntBASIC13.47□□□□□ -0.25
SEC61A1P61619 TEX28P2-201ENST00000617764 1221 ntBASIC13.47□□□□□ -0.25
SEC61A1P61619 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SEC61A1P61619 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SEC61A1P61619 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.47□□□□□ -0.25
SEC61A1P61619 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SEC61A1P61619 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.47□□□□□ -0.25
SEC61A1P61619 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms