Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.66□□□□□ -0.06
VSX2P58304 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.66□□□□□ -0.06
VSX2P58304 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.66□□□□□ -0.06
VSX2P58304 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.66□□□□□ -0.06
VSX2P58304 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 AC093525.8-201ENST00000624099 1342 ntBASIC14.66□□□□□ -0.06
VSX2P58304 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.65□□□□□ -0.06
VSX2P58304 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
VSX2P58304 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.65□□□□□ -0.06
VSX2P58304 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.65□□□□□ -0.06
VSX2P58304 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
VSX2P58304 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 OR8S1-201ENST00000310194 1080 ntBASIC14.65□□□□□ -0.06
VSX2P58304 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.65□□□□□ -0.06
VSX2P58304 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VSX2P58304 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VSX2P58304 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.65□□□□□ -0.06
VSX2P58304 KRT43P-201ENST00000434019 910 ntBASIC14.65□□□□□ -0.06
VSX2P58304 AC022137.2-201ENST00000503482 481 ntBASIC14.65□□□□□ -0.06
VSX2P58304 KRT18P25-201ENST00000508931 1278 ntBASIC14.65□□□□□ -0.06
VSX2P58304 AP001889.1-201ENST00000525414 633 ntBASIC14.65□□□□□ -0.06
VSX2P58304 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.65□□□□□ -0.06
VSX2P58304 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.65□□□□□ -0.06
VSX2P58304 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.65□□□□□ -0.06
VSX2P58304 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.65□□□□□ -0.06
VSX2P58304 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.65□□□□□ -0.06
VSX2P58304 AP005019.2-201ENST00000615104 511 ntBASIC14.65□□□□□ -0.06
VSX2P58304 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.65□□□□□ -0.06
VSX2P58304 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.65□□□□□ -0.06
VSX2P58304 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
VSX2P58304 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.65□□□□□ -0.06
VSX2P58304 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
VSX2P58304 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.65□□□□□ -0.06
VSX2P58304 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
VSX2P58304 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.65□□□□□ -0.06
VSX2P58304 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.65□□□□□ -0.06
VSX2P58304 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VSX2P58304 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
VSX2P58304 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
VSX2P58304 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.64□□□□□ -0.07
VSX2P58304 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
VSX2P58304 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.64□□□□□ -0.07
VSX2P58304 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.64□□□□□ -0.07
VSX2P58304 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
VSX2P58304 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
VSX2P58304 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.64□□□□□ -0.07
VSX2P58304 AL158070.2-201ENST00000623713 1621 ntBASIC14.64□□□□□ -0.07
VSX2P58304 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.64□□□□□ -0.07
VSX2P58304 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 RNU1-114P-201ENST00000365297 166 ntBASIC14.64□□□□□ -0.07
VSX2P58304 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.64□□□□□ -0.07
VSX2P58304 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.64□□□□□ -0.07
VSX2P58304 NUS1P3-201ENST00000423502 862 ntBASIC14.64□□□□□ -0.07
VSX2P58304 AC234783.1-201ENST00000441761 496 ntBASIC14.64□□□□□ -0.07
VSX2P58304 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.64□□□□□ -0.07
VSX2P58304 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.64□□□□□ -0.07
VSX2P58304 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.64□□□□□ -0.07
VSX2P58304 CROCCP4-201ENST00000457096 498 ntBASIC14.64□□□□□ -0.07
VSX2P58304 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.64□□□□□ -0.07
VSX2P58304 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.64□□□□□ -0.07
VSX2P58304 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.64□□□□□ -0.07
VSX2P58304 AC106886.1-201ENST00000568660 600 ntBASIC14.64□□□□□ -0.07
VSX2P58304 AL022328.1-201ENST00000610050 478 ntBASIC14.64□□□□□ -0.07
VSX2P58304 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
VSX2P58304 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.64□□□□□ -0.07
VSX2P58304 AC148477.4-201ENST00000613430 1793 ntBASIC14.64□□□□□ -0.07
VSX2P58304 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms