Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLDN8P56748 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 BTBD7P1-201ENST00000447253 1453 ntBASIC14.53□□□□□ -0.08
CLDN8P56748 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN8P56748 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
CLDN8P56748 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN8P56748 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN8P56748 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CLDN8P56748 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN8P56748 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.53□□□□□ -0.08
CLDN8P56748 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN8P56748 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN8P56748 AL391069.4-201ENST00000609583 481 ntBASIC14.53□□□□□ -0.08
CLDN8P56748 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN8P56748 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 AC097359.2-201ENST00000604992 2389 ntBASIC14.53□□□□□ -0.08
CLDN8P56748 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN8P56748 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN8P56748 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CLDN8P56748 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
CLDN8P56748 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN8P56748 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.52□□□□□ -0.08
CLDN8P56748 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CLDN8P56748 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.52□□□□□ -0.08
CLDN8P56748 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.52□□□□□ -0.08
CLDN8P56748 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CLDN8P56748 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN8P56748 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN8P56748 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
CLDN8P56748 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN8P56748 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
CLDN8P56748 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.52□□□□□ -0.09
CLDN8P56748 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.52□□□□□ -0.09
CLDN8P56748 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 AP001267.2-201ENST00000532619 2086 ntBASIC14.52□□□□□ -0.09
CLDN8P56748 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CLDN8P56748 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.52□□□□□ -0.09
CLDN8P56748 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 AL157414.3-201ENST00000624276 1954 ntBASIC14.52□□□□□ -0.09
CLDN8P56748 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN8P56748 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CLDN8P56748 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLDN8P56748 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.52□□□□□ -0.09
CLDN8P56748 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN8P56748 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CLDN8P56748 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CLDN8P56748 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CLDN8P56748 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CLDN8P56748 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLDN8P56748 AC093525.8-201ENST00000624099 1342 ntBASIC14.51□□□□□ -0.09
CLDN8P56748 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 MIR600HG-201ENST00000449175 5984 ntBASIC14.51□□□□□ -0.09
CLDN8P56748 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 TREML5P-201ENST00000421694 576 ntBASIC14.51□□□□□ -0.09
CLDN8P56748 TSSK5P-201ENST00000423978 907 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms