Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 AP002414.2-201ENST00000591780 3365 ntBASIC14.9□□□□□ -0.02
AP1S2P56377 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.9□□□□□ -0.02
AP1S2P56377 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
AP1S2P56377 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
AP1S2P56377 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.89□□□□□ -0.03
AP1S2P56377 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.89□□□□□ -0.03
AP1S2P56377 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.89□□□□□ -0.03
AP1S2P56377 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 SOCS2P1-201ENST00000417727 557 ntBASIC14.89□□□□□ -0.03
AP1S2P56377 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.89□□□□□ -0.03
AP1S2P56377 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.89□□□□□ -0.03
AP1S2P56377 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.89□□□□□ -0.03
AP1S2P56377 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.89□□□□□ -0.03
AP1S2P56377 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.89□□□□□ -0.03
AP1S2P56377 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.89□□□□□ -0.03
AP1S2P56377 AC124283.3-201ENST00000570869 594 ntBASIC14.89□□□□□ -0.03
AP1S2P56377 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.89□□□□□ -0.03
AP1S2P56377 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
AP1S2P56377 AL355385.1-201ENST00000606123 409 ntBASIC14.89□□□□□ -0.03
AP1S2P56377 MIR8072-201ENST00000614241 80 ntBASIC14.89□□□□□ -0.03
AP1S2P56377 PRSS30P-206ENST00000641773 873 ntBASIC14.89□□□□□ -0.03
AP1S2P56377 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.89□□□□□ -0.03
AP1S2P56377 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
AP1S2P56377 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
AP1S2P56377 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.89□□□□□ -0.03
AP1S2P56377 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
AP1S2P56377 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
AP1S2P56377 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.89□□□□□ -0.03
AP1S2P56377 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.89□□□□□ -0.03
AP1S2P56377 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S2P56377 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
AP1S2P56377 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
AP1S2P56377 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
AP1S2P56377 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.89□□□□□ -0.03
AP1S2P56377 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
AP1S2P56377 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.88□□□□□ -0.03
AP1S2P56377 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
AP1S2P56377 PIN1P1-201ENST00000412108 996 ntBASIC14.88□□□□□ -0.03
AP1S2P56377 AC002472.2-201ENST00000442739 958 ntBASIC14.88□□□□□ -0.03
AP1S2P56377 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.88□□□□□ -0.03
AP1S2P56377 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.88□□□□□ -0.03
AP1S2P56377 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.88□□□□□ -0.03
AP1S2P56377 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
AP1S2P56377 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
AP1S2P56377 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
AP1S2P56377 KRT8P22-201ENST00000562317 1415 ntBASIC14.88□□□□□ -0.03
AP1S2P56377 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.88□□□□□ -0.03
AP1S2P56377 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 AC099063.4-201ENST00000641099 1602 ntBASIC14.88□□□□□ -0.03
AP1S2P56377 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
AP1S2P56377 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.88□□□□□ -0.03
AP1S2P56377 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S2P56377 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
AP1S2P56377 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.87□□□□□ -0.03
AP1S2P56377 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
AP1S2P56377 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.87□□□□□ -0.03
AP1S2P56377 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.87□□□□□ -0.03
AP1S2P56377 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 AL359258.3-201ENST00000622910 2331 ntBASIC14.87□□□□□ -0.03
AP1S2P56377 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.87□□□□□ -0.03
AP1S2P56377 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms