Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CDH13P55290 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH13P55290 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH13P55290 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CDH13P55290 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH13P55290 AC104457.1-201ENST00000401024 814 ntBASIC14.99□□□□□ -0.01
CDH13P55290 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH13P55290 KLF2P3-201ENST00000451977 1087 ntBASIC14.99□□□□□ -0.01
CDH13P55290 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH13P55290 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH13P55290 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH13P55290 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH13P55290 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH13P55290 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDH13P55290 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH13P55290 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
CDH13P55290 AL645728.2-202ENST00000641679 227 ntBASIC14.99□□□□□ -0.01
CDH13P55290 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.99□□□□□ -0.01
CDH13P55290 ST20-AS1-201ENST00000560255 4223 ntBASIC14.99□□□□□ -0.01
CDH13P55290 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH13P55290 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CDH13P55290 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CDH13P55290 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH13P55290 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH13P55290 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDH13P55290 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH13P55290 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
CDH13P55290 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDH13P55290 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH13P55290 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDH13P55290 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH13P55290 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH13P55290 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH13P55290 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH13P55290 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH13P55290 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDH13P55290 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH13P55290 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH13P55290 KRT18P13-201ENST00000400056 1290 ntBASIC14.98□□□□□ -0.01
CDH13P55290 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH13P55290 AC107890.1-201ENST00000422478 521 ntBASIC14.98□□□□□ -0.01
CDH13P55290 AC092580.3-201ENST00000430932 139 ntBASIC14.98□□□□□ -0.01
CDH13P55290 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH13P55290 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.98□□□□□ -0.01
CDH13P55290 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH13P55290 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH13P55290 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH13P55290 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.98□□□□□ -0.01
CDH13P55290 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH13P55290 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH13P55290 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDH13P55290 AC025678.2-201ENST00000562061 970 ntBASIC14.98□□□□□ -0.01
CDH13P55290 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH13P55290 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH13P55290 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH13P55290 AL844908.2-201ENST00000609461 460 ntBASIC14.98□□□□□ -0.01
CDH13P55290 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CDH13P55290 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH13P55290 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDH13P55290 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms