Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 CLUHP6-201ENST00000580789 941 ntBASIC16.35■□□□□ 0.21
RAD23BP54727 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.35■□□□□ 0.21
RAD23BP54727 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RAD23BP54727 CU634019.7-201ENST00000624153 1185 ntBASIC16.35■□□□□ 0.21
RAD23BP54727 FP236241.2-201ENST00000624906 1185 ntBASIC16.35■□□□□ 0.21
RAD23BP54727 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.35■□□□□ 0.21
RAD23BP54727 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.35■□□□□ 0.21
RAD23BP54727 AC105233.6-201ENST00000642093 218 ntBASIC16.35■□□□□ 0.21
RAD23BP54727 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAD23BP54727 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAD23BP54727 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.35■□□□□ 0.21
RAD23BP54727 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.35■□□□□ 0.21
RAD23BP54727 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.35■□□□□ 0.21
RAD23BP54727 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RAD23BP54727 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAD23BP54727 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAD23BP54727 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RAD23BP54727 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RAD23BP54727 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAD23BP54727 AC012508.2-201ENST00000567613 1472 ntBASIC16.35■□□□□ 0.21
RAD23BP54727 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.35■□□□□ 0.21
RAD23BP54727 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.35■□□□□ 0.21
RAD23BP54727 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 AL158070.2-201ENST00000623713 1621 ntBASIC16.34■□□□□ 0.21
RAD23BP54727 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
RAD23BP54727 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RAD23BP54727 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.34■□□□□ 0.21
RAD23BP54727 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.34■□□□□ 0.21
RAD23BP54727 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.34■□□□□ 0.21
RAD23BP54727 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAD23BP54727 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.34■□□□□ 0.21
RAD23BP54727 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RAD23BP54727 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RAD23BP54727 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.34■□□□□ 0.21
RAD23BP54727 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.34■□□□□ 0.21
RAD23BP54727 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.34■□□□□ 0.21
RAD23BP54727 AL162726.2-201ENST00000438986 1017 ntBASIC16.34■□□□□ 0.21
RAD23BP54727 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.34■□□□□ 0.21
RAD23BP54727 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.34■□□□□ 0.21
RAD23BP54727 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RAD23BP54727 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.34■□□□□ 0.21
RAD23BP54727 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
RAD23BP54727 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.34■□□□□ 0.21
RAD23BP54727 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RAD23BP54727 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RAD23BP54727 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.34■□□□□ 0.21
RAD23BP54727 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.34■□□□□ 0.21
RAD23BP54727 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.34■□□□□ 0.21
RAD23BP54727 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.34■□□□□ 0.21
RAD23BP54727 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.34■□□□□ 0.21
RAD23BP54727 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RAD23BP54727 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD23BP54727 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.33■□□□□ 0.21
RAD23BP54727 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RAD23BP54727 AGAP7P-201ENST00000582299 2062 ntBASIC16.33■□□□□ 0.21
RAD23BP54727 AGAP14-201ENST00000624701 2060 ntBASIC16.33■□□□□ 0.21
RAD23BP54727 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.33■□□□□ 0.21
RAD23BP54727 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RAD23BP54727 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAD23BP54727 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAD23BP54727 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.33■□□□□ 0.2
RAD23BP54727 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RAD23BP54727 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
RAD23BP54727 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAD23BP54727 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.33■□□□□ 0.2
RAD23BP54727 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAD23BP54727 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RAD23BP54727 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.33■□□□□ 0.2
RAD23BP54727 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAD23BP54727 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.33■□□□□ 0.2
RAD23BP54727 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.33■□□□□ 0.2
RAD23BP54727 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.33■□□□□ 0.2
RAD23BP54727 BX539320.1-201ENST00000623759 877 ntBASIC16.33■□□□□ 0.2
RAD23BP54727 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.33■□□□□ 0.2
RAD23BP54727 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.33■□□□□ 0.2
RAD23BP54727 PRSS30P-206ENST00000641773 873 ntBASIC16.33■□□□□ 0.2
RAD23BP54727 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAD23BP54727 WASH3P-207ENST00000560956 1394 ntBASIC16.33■□□□□ 0.2
RAD23BP54727 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAD23BP54727 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.33■□□□□ 0.2
RAD23BP54727 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.33■□□□□ 0.2
RAD23BP54727 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAD23BP54727 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAD23BP54727 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAD23BP54727 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms