Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TUBP50607 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TUBP50607 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 BX539320.1-201ENST00000623759 877 ntBASIC16.12■□□□□ 0.17
TUBP50607 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.12■□□□□ 0.17
TUBP50607 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.12■□□□□ 0.17
TUBP50607 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TUBP50607 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TUBP50607 AC087481.3-201ENST00000602886 1894 ntBASIC16.12■□□□□ 0.17
TUBP50607 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.11■□□□□ 0.17
TUBP50607 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TUBP50607 CICP24-201ENST00000605464 2705 ntBASIC16.11■□□□□ 0.17
TUBP50607 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.11■□□□□ 0.17
TUBP50607 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TUBP50607 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.11■□□□□ 0.17
TUBP50607 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.11■□□□□ 0.17
TUBP50607 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TUBP50607 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TUBP50607 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TUBP50607 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 MIR658-201ENST00000385210 100 ntBASIC16.11■□□□□ 0.17
TUBP50607 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.11■□□□□ 0.17
TUBP50607 NUS1P3-201ENST00000423502 862 ntBASIC16.11■□□□□ 0.17
TUBP50607 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TUBP50607 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.11■□□□□ 0.17
TUBP50607 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 CROCCP4-201ENST00000457096 498 ntBASIC16.11■□□□□ 0.17
TUBP50607 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.11■□□□□ 0.17
TUBP50607 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.11■□□□□ 0.17
TUBP50607 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.11■□□□□ 0.17
TUBP50607 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.11■□□□□ 0.17
TUBP50607 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TUBP50607 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TUBP50607 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TUBP50607 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.11■□□□□ 0.17
TUBP50607 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.11■□□□□ 0.17
TUBP50607 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
TUBP50607 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 AC136621.1-201ENST00000624017 2304 ntBASIC16.11■□□□□ 0.17
TUBP50607 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.11■□□□□ 0.17
TUBP50607 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 AC106881.1-201ENST00000605849 3329 ntBASIC16.11■□□□□ 0.17
TUBP50607 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
TUBP50607 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBP50607 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TUBP50607 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBP50607 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TUBP50607 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TUBP50607 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TUBP50607 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TUBP50607 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBP50607 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.1■□□□□ 0.17
TUBP50607 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBP50607 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBP50607 AC079781.5-202ENST00000641784 3743 ntBASIC16.1■□□□□ 0.17
TUBP50607 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TUBP50607 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBP50607 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.1■□□□□ 0.17
TUBP50607 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBP50607 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
TUBP50607 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.1■□□□□ 0.17
TUBP50607 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TUBP50607 AL645937.2-201ENST00000396808 931 ntBASIC16.1■□□□□ 0.17
TUBP50607 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.1■□□□□ 0.17
TUBP50607 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TUBP50607 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TUBP50607 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.1■□□□□ 0.17
TUBP50607 BCRP2-202ENST00000447763 634 ntBASIC16.1■□□□□ 0.17
TUBP50607 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.1■□□□□ 0.17
TUBP50607 AC119751.2-201ENST00000504529 210 ntBASIC16.1■□□□□ 0.17
TUBP50607 BCRP6-201ENST00000510112 632 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms