Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ERFP50548 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ERFP50548 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ERFP50548 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ERFP50548 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.85□□□□□ -0.03
ERFP50548 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ERFP50548 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.85□□□□□ -0.03
ERFP50548 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.85□□□□□ -0.03
ERFP50548 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.84□□□□□ -0.03
ERFP50548 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.84□□□□□ -0.03
ERFP50548 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 AL359183.1-201ENST00000623796 2132 ntBASIC14.84□□□□□ -0.03
ERFP50548 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.84□□□□□ -0.03
ERFP50548 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ERFP50548 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ERFP50548 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ERFP50548 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
ERFP50548 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
ERFP50548 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.84□□□□□ -0.03
ERFP50548 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.84□□□□□ -0.03
ERFP50548 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.84□□□□□ -0.03
ERFP50548 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.84□□□□□ -0.03
ERFP50548 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ERFP50548 AL121912.1-201ENST00000603683 238 ntBASIC14.84□□□□□ -0.03
ERFP50548 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.84□□□□□ -0.03
ERFP50548 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.84□□□□□ -0.03
ERFP50548 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ERFP50548 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ERFP50548 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.84□□□□□ -0.03
ERFP50548 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.84□□□□□ -0.03
ERFP50548 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ERFP50548 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ERFP50548 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ERFP50548 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ERFP50548 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.84□□□□□ -0.03
ERFP50548 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ERFP50548 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ERFP50548 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
ERFP50548 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ERFP50548 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ERFP50548 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ERFP50548 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
ERFP50548 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ERFP50548 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ERFP50548 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.83□□□□□ -0.04
ERFP50548 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.83□□□□□ -0.04
ERFP50548 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ERFP50548 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERFP50548 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERFP50548 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERFP50548 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.83□□□□□ -0.04
ERFP50548 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.83□□□□□ -0.04
ERFP50548 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ERFP50548 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ERFP50548 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ERFP50548 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.83□□□□□ -0.04
ERFP50548 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ERFP50548 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.83□□□□□ -0.04
ERFP50548 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.83□□□□□ -0.04
ERFP50548 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.83□□□□□ -0.04
ERFP50548 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.83□□□□□ -0.04
ERFP50548 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.83□□□□□ -0.04
ERFP50548 CXCL1P1-201ENST00000502804 216 ntBASIC14.83□□□□□ -0.04
ERFP50548 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.83□□□□□ -0.04
ERFP50548 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
ERFP50548 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.83□□□□□ -0.04
ERFP50548 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.83□□□□□ -0.04
ERFP50548 AC148477.8-201ENST00000624298 468 ntBASIC14.83□□□□□ -0.04
ERFP50548 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.83□□□□□ -0.04
ERFP50548 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ERFP50548 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERFP50548 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.83□□□□□ -0.04
ERFP50548 AL139385.1-201ENST00000611744 3272 ntBASIC14.83□□□□□ -0.04
ERFP50548 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERFP50548 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERFP50548 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.83□□□□□ -0.04
ERFP50548 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERFP50548 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
ERFP50548 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms