Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.96□□□□□ -0.17
CENPAP49450 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CENPAP49450 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.96□□□□□ -0.17
CENPAP49450 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.96□□□□□ -0.17
CENPAP49450 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
CENPAP49450 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.96□□□□□ -0.17
CENPAP49450 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CENPAP49450 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.96□□□□□ -0.17
CENPAP49450 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.96□□□□□ -0.17
CENPAP49450 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CENPAP49450 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.96□□□□□ -0.17
CENPAP49450 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.96□□□□□ -0.17
CENPAP49450 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.96□□□□□ -0.17
CENPAP49450 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.96□□□□□ -0.17
CENPAP49450 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.96□□□□□ -0.17
CENPAP49450 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.96□□□□□ -0.17
CENPAP49450 BANF1P1-201ENST00000553684 263 ntBASIC13.96□□□□□ -0.17
CENPAP49450 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.96□□□□□ -0.17
CENPAP49450 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CENPAP49450 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CENPAP49450 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.96□□□□□ -0.17
CENPAP49450 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.96□□□□□ -0.17
CENPAP49450 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CENPAP49450 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.96□□□□□ -0.17
CENPAP49450 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.96□□□□□ -0.17
CENPAP49450 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.96□□□□□ -0.18
CENPAP49450 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CENPAP49450 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CENPAP49450 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CENPAP49450 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CENPAP49450 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CENPAP49450 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CENPAP49450 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CENPAP49450 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.95□□□□□ -0.18
CENPAP49450 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CENPAP49450 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.95□□□□□ -0.18
CENPAP49450 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 AC073869.1-201ENST00000415574 2762 ntBASIC13.95□□□□□ -0.18
CENPAP49450 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.95□□□□□ -0.18
CENPAP49450 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CENPAP49450 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.95□□□□□ -0.18
CENPAP49450 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.95□□□□□ -0.18
CENPAP49450 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.95□□□□□ -0.18
CENPAP49450 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.95□□□□□ -0.18
CENPAP49450 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.95□□□□□ -0.18
CENPAP49450 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.95□□□□□ -0.18
CENPAP49450 GPS2P2-201ENST00000430745 888 ntBASIC13.95□□□□□ -0.18
CENPAP49450 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.95□□□□□ -0.18
CENPAP49450 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.95□□□□□ -0.18
CENPAP49450 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.95□□□□□ -0.18
CENPAP49450 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.95□□□□□ -0.18
CENPAP49450 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.95□□□□□ -0.18
CENPAP49450 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.95□□□□□ -0.18
CENPAP49450 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.95□□□□□ -0.18
CENPAP49450 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CENPAP49450 AC009093.7-201ENST00000623853 1223 ntBASIC13.95□□□□□ -0.18
CENPAP49450 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.95□□□□□ -0.18
CENPAP49450 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CENPAP49450 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
CENPAP49450 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CENPAP49450 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CENPAP49450 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.95□□□□□ -0.18
CENPAP49450 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CENPAP49450 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CENPAP49450 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms