Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC003102.2-201ENST00000589195 1469 ntBASIC16.63■□□□□ 0.25
HTTP42858 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HTTP42858 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.62■□□□□ 0.25
HTTP42858 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HTTP42858 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HTTP42858 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HTTP42858 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.62■□□□□ 0.25
HTTP42858 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HTTP42858 RN7SKP109-201ENST00000410592 316 ntBASIC16.62■□□□□ 0.25
HTTP42858 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.62■□□□□ 0.25
HTTP42858 HLA-DPA2-205ENST00000433582 733 ntBASIC16.62■□□□□ 0.25
HTTP42858 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC16.62■□□□□ 0.25
HTTP42858 AC138701.2-201ENST00000553634 226 ntBASIC16.62■□□□□ 0.25
HTTP42858 AC002044.2-201ENST00000624910 970 ntBASIC16.62■□□□□ 0.25
HTTP42858 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HTTP42858 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HTTP42858 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HTTP42858 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.62■□□□□ 0.25
HTTP42858 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HTTP42858 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.62■□□□□ 0.25
HTTP42858 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.62■□□□□ 0.25
HTTP42858 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.62■□□□□ 0.25
HTTP42858 AC063952.3-201ENST00000467756 308 ntBASIC16.62■□□□□ 0.25
HTTP42858 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.62■□□□□ 0.25
HTTP42858 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.62■□□□□ 0.25
HTTP42858 MIR5001-201ENST00000580185 100 ntBASIC16.62■□□□□ 0.25
HTTP42858 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HTTP42858 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC16.62■□□□□ 0.25
HTTP42858 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HTTP42858 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.62■□□□□ 0.25
HTTP42858 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HTTP42858 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.61■□□□□ 0.25
HTTP42858 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.61■□□□□ 0.25
HTTP42858 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HTTP42858 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.61■□□□□ 0.25
HTTP42858 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.61■□□□□ 0.25
HTTP42858 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC16.61■□□□□ 0.25
HTTP42858 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 TMBIM7P-202ENST00000641474 1516 ntBASIC16.61■□□□□ 0.25
HTTP42858 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 AC105250.1-201ENST00000509378 2057 ntBASIC16.61■□□□□ 0.25
HTTP42858 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HTTP42858 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.61■□□□□ 0.25
HTTP42858 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.61■□□□□ 0.25
HTTP42858 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.61■□□□□ 0.25
HTTP42858 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.61■□□□□ 0.25
HTTP42858 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HTTP42858 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.61■□□□□ 0.25
HTTP42858 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HTTP42858 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HTTP42858 AC006483.2-201ENST00000609813 515 ntBASIC16.61■□□□□ 0.25
HTTP42858 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.61■□□□□ 0.25
HTTP42858 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HTTP42858 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HTTP42858 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTTP42858 AP000845.1-201ENST00000581677 2131 ntBASIC16.6■□□□□ 0.25
HTTP42858 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HTTP42858 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
HTTP42858 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTTP42858 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.6■□□□□ 0.25
HTTP42858 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HTTP42858 AC023141.7-201ENST00000430646 407 ntBASIC16.6■□□□□ 0.25
HTTP42858 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HTTP42858 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.6■□□□□ 0.25
HTTP42858 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.6■□□□□ 0.25
HTTP42858 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
HTTP42858 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTTP42858 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTTP42858 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.6■□□□□ 0.25
HTTP42858 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HTTP42858 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.6■□□□□ 0.25
HTTP42858 GUSBP10-201ENST00000417412 665 ntBASIC16.6■□□□□ 0.25
HTTP42858 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.6■□□□□ 0.25
HTTP42858 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.6■□□□□ 0.25
HTTP42858 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC16.6■□□□□ 0.25
HTTP42858 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC16.6■□□□□ 0.25
HTTP42858 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTTP42858 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTTP42858 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HTTP42858 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HTTP42858 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HTTP42858 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HTTP42858 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HTTP42858 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms