Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.51□□□□□ -0.09
PTPN6P29350 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.51□□□□□ -0.09
PTPN6P29350 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.51□□□□□ -0.09
PTPN6P29350 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.51□□□□□ -0.09
PTPN6P29350 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PTPN6P29350 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.51□□□□□ -0.09
PTPN6P29350 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.51□□□□□ -0.09
PTPN6P29350 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PTPN6P29350 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.51□□□□□ -0.09
PTPN6P29350 AC114501.2-201ENST00000439631 535 ntBASIC14.51□□□□□ -0.09
PTPN6P29350 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.51□□□□□ -0.09
PTPN6P29350 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.51□□□□□ -0.09
PTPN6P29350 TERF1P3-201ENST00000505638 1227 ntBASIC14.51□□□□□ -0.09
PTPN6P29350 AC135586.1-201ENST00000539323 574 ntBASIC14.51□□□□□ -0.09
PTPN6P29350 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.51□□□□□ -0.09
PTPN6P29350 LINC02084-201ENST00000606069 1096 ntBASIC14.51□□□□□ -0.09
PTPN6P29350 AC074044.1-201ENST00000609673 707 ntBASIC14.51□□□□□ -0.09
PTPN6P29350 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.51□□□□□ -0.09
PTPN6P29350 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.51□□□□□ -0.09
PTPN6P29350 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PTPN6P29350 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PTPN6P29350 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PTPN6P29350 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.51□□□□□ -0.09
PTPN6P29350 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.51□□□□□ -0.09
PTPN6P29350 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PTPN6P29350 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.51□□□□□ -0.09
PTPN6P29350 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PTPN6P29350 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.5□□□□□ -0.09
PTPN6P29350 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PTPN6P29350 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.5□□□□□ -0.09
PTPN6P29350 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.5□□□□□ -0.09
PTPN6P29350 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.5□□□□□ -0.09
PTPN6P29350 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.5□□□□□ -0.09
PTPN6P29350 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
PTPN6P29350 AC138761.1-201ENST00000584393 385 ntBASIC14.5□□□□□ -0.09
PTPN6P29350 AC000095.1-201ENST00000603208 874 ntBASIC14.5□□□□□ -0.09
PTPN6P29350 AL109936.8-201ENST00000641772 604 ntBASIC14.5□□□□□ -0.09
PTPN6P29350 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PTPN6P29350 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 AC007787.1-201ENST00000588095 1583 ntBASIC14.5□□□□□ -0.09
PTPN6P29350 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.5□□□□□ -0.09
PTPN6P29350 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.5□□□□□ -0.09
PTPN6P29350 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PTPN6P29350 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PTPN6P29350 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
PTPN6P29350 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
PTPN6P29350 AC138969.3-201ENST00000546612 1459 ntBASIC14.5□□□□□ -0.09
PTPN6P29350 AC138932.2-201ENST00000548268 1459 ntBASIC14.5□□□□□ -0.09
PTPN6P29350 AC126755.4-201ENST00000549796 1459 ntBASIC14.5□□□□□ -0.09
PTPN6P29350 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.5□□□□□ -0.09
PTPN6P29350 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.5□□□□□ -0.09
PTPN6P29350 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN6P29350 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
PTPN6P29350 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PTPN6P29350 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms