Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.54□□□□□ -0.24
MSR1P21757 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.54□□□□□ -0.24
MSR1P21757 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.54□□□□□ -0.24
MSR1P21757 AC055876.2-201ENST00000531834 546 ntBASIC13.54□□□□□ -0.24
MSR1P21757 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.54□□□□□ -0.24
MSR1P21757 AC027796.2-201ENST00000575326 344 ntBASIC13.54□□□□□ -0.24
MSR1P21757 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
MSR1P21757 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.54□□□□□ -0.24
MSR1P21757 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.54□□□□□ -0.24
MSR1P21757 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 AC004790.1-201ENST00000612686 536 ntBASIC13.54□□□□□ -0.24
MSR1P21757 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.54□□□□□ -0.24
MSR1P21757 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.54□□□□□ -0.24
MSR1P21757 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
MSR1P21757 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 REXO1L2P-201ENST00000425429 2069 ntBASIC13.54□□□□□ -0.24
MSR1P21757 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.54□□□□□ -0.24
MSR1P21757 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.54□□□□□ -0.24
MSR1P21757 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
MSR1P21757 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.53□□□□□ -0.24
MSR1P21757 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.53□□□□□ -0.24
MSR1P21757 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
MSR1P21757 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.53□□□□□ -0.24
MSR1P21757 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
MSR1P21757 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.53□□□□□ -0.24
MSR1P21757 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
MSR1P21757 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.53□□□□□ -0.24
MSR1P21757 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
MSR1P21757 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.53□□□□□ -0.24
MSR1P21757 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
MSR1P21757 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.53□□□□□ -0.24
MSR1P21757 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.53□□□□□ -0.24
MSR1P21757 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.53□□□□□ -0.24
MSR1P21757 GAPDHP40-201ENST00000505218 1006 ntBASIC13.53□□□□□ -0.24
MSR1P21757 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.53□□□□□ -0.24
MSR1P21757 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.53□□□□□ -0.24
MSR1P21757 AL049840.4-201ENST00000602422 811 ntBASIC13.53□□□□□ -0.24
MSR1P21757 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
MSR1P21757 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.53□□□□□ -0.24
MSR1P21757 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.53□□□□□ -0.24
MSR1P21757 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
MSR1P21757 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
MSR1P21757 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
MSR1P21757 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
MSR1P21757 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
MSR1P21757 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.53□□□□□ -0.24
MSR1P21757 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MSR1P21757 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
MSR1P21757 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
MSR1P21757 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
MSR1P21757 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
MSR1P21757 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
MSR1P21757 AC013726.1-201ENST00000563747 2285 ntBASIC13.52□□□□□ -0.24
MSR1P21757 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.52□□□□□ -0.24
MSR1P21757 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
MSR1P21757 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
MSR1P21757 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
MSR1P21757 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
MSR1P21757 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
MSR1P21757 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms