Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.41■□□□□ 0.22
CD58P19256 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.41■□□□□ 0.22
CD58P19256 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CD58P19256 AL162726.2-201ENST00000438986 1017 ntBASIC16.41■□□□□ 0.22
CD58P19256 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.41■□□□□ 0.22
CD58P19256 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CD58P19256 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.41■□□□□ 0.22
CD58P19256 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.41■□□□□ 0.22
CD58P19256 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.41■□□□□ 0.22
CD58P19256 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.41■□□□□ 0.22
CD58P19256 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.41■□□□□ 0.22
CD58P19256 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.41■□□□□ 0.22
CD58P19256 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.41■□□□□ 0.22
CD58P19256 BX539320.1-201ENST00000623759 877 ntBASIC16.41■□□□□ 0.22
CD58P19256 AC005252.2-201ENST00000624630 1141 ntBASIC16.41■□□□□ 0.22
CD58P19256 AC105233.6-201ENST00000642093 218 ntBASIC16.41■□□□□ 0.22
CD58P19256 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CD58P19256 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CD58P19256 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.41■□□□□ 0.22
CD58P19256 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 AC093525.8-201ENST00000624099 1342 ntBASIC16.41■□□□□ 0.22
CD58P19256 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.41■□□□□ 0.22
CD58P19256 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD58P19256 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CD58P19256 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CD58P19256 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.4■□□□□ 0.22
CD58P19256 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.4■□□□□ 0.22
CD58P19256 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CD58P19256 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CD58P19256 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CD58P19256 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CD58P19256 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.4■□□□□ 0.22
CD58P19256 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CD58P19256 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.4■□□□□ 0.22
CD58P19256 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CD58P19256 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.4■□□□□ 0.22
CD58P19256 AC098614.1-201ENST00000368528 745 ntBASIC16.4■□□□□ 0.22
CD58P19256 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.4■□□□□ 0.22
CD58P19256 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.4■□□□□ 0.22
CD58P19256 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.4■□□□□ 0.22
CD58P19256 AC104457.1-201ENST00000401024 814 ntBASIC16.4■□□□□ 0.22
CD58P19256 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.4■□□□□ 0.22
CD58P19256 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CD58P19256 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CD58P19256 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.4■□□□□ 0.22
CD58P19256 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CD58P19256 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.4■□□□□ 0.22
CD58P19256 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.4■□□□□ 0.22
CD58P19256 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.4■□□□□ 0.22
CD58P19256 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.4■□□□□ 0.22
CD58P19256 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.4■□□□□ 0.22
CD58P19256 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.4■□□□□ 0.22
CD58P19256 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CD58P19256 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CD58P19256 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 AC012508.2-201ENST00000567613 1472 ntBASIC16.4■□□□□ 0.22
CD58P19256 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CD58P19256 LINC00528-201ENST00000600723 2160 ntBASIC16.4■□□□□ 0.22
CD58P19256 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD58P19256 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.39■□□□□ 0.22
CD58P19256 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.39■□□□□ 0.22
CD58P19256 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD58P19256 REXO1L5P-201ENST00000622260 2098 ntBASIC16.39■□□□□ 0.21
CD58P19256 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD58P19256 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD58P19256 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD58P19256 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms