Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.52□□□□□ -0.41
DEFA4P12838 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 AC023141.5-201ENST00000458585 616 ntBASIC12.52□□□□□ -0.41
DEFA4P12838 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.52□□□□□ -0.41
DEFA4P12838 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.52□□□□□ -0.41
DEFA4P12838 AC105021.1-202ENST00000570572 669 ntBASIC12.52□□□□□ -0.41
DEFA4P12838 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.52□□□□□ -0.41
DEFA4P12838 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.52□□□□□ -0.41
DEFA4P12838 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
DEFA4P12838 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
DEFA4P12838 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.52□□□□□ -0.41
DEFA4P12838 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.52□□□□□ -0.41
DEFA4P12838 MIR6080-201ENST00000617359 66 ntBASIC12.52□□□□□ -0.41
DEFA4P12838 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
DEFA4P12838 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 AL035456.1-201ENST00000456064 1369 ntBASIC12.52□□□□□ -0.41
DEFA4P12838 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.52□□□□□ -0.41
DEFA4P12838 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.52□□□□□ -0.41
DEFA4P12838 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
DEFA4P12838 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DEFA4P12838 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
DEFA4P12838 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
DEFA4P12838 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.51□□□□□ -0.41
DEFA4P12838 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.51□□□□□ -0.41
DEFA4P12838 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.51□□□□□ -0.41
DEFA4P12838 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
DEFA4P12838 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
DEFA4P12838 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.51□□□□□ -0.41
DEFA4P12838 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.51□□□□□ -0.41
DEFA4P12838 FAM58DP-201ENST00000428076 619 ntBASIC12.51□□□□□ -0.41
DEFA4P12838 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.51□□□□□ -0.41
DEFA4P12838 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.51□□□□□ -0.41
DEFA4P12838 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.51□□□□□ -0.41
DEFA4P12838 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.51□□□□□ -0.41
DEFA4P12838 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.51□□□□□ -0.41
DEFA4P12838 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.51□□□□□ -0.41
DEFA4P12838 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.51□□□□□ -0.41
DEFA4P12838 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
DEFA4P12838 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
DEFA4P12838 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
DEFA4P12838 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.51□□□□□ -0.41
DEFA4P12838 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
DEFA4P12838 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.51□□□□□ -0.41
DEFA4P12838 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.51□□□□□ -0.41
DEFA4P12838 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DEFA4P12838 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
DEFA4P12838 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.5□□□□□ -0.41
DEFA4P12838 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
DEFA4P12838 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.5□□□□□ -0.41
DEFA4P12838 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms