Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINC00528-201ENST00000600723 2160 ntBASIC16.95■□□□□ 0.3
COL11A1P12107 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
COL11A1P12107 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL11A1P12107 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.95■□□□□ 0.3
COL11A1P12107 TMBIM7P-202ENST00000641474 1516 ntBASIC16.94■□□□□ 0.3
COL11A1P12107 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COL11A1P12107 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL11A1P12107 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL11A1P12107 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
COL11A1P12107 AL109954.1-202ENST00000564051 2148 ntBASIC16.94■□□□□ 0.3
COL11A1P12107 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL11A1P12107 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.94■□□□□ 0.3
COL11A1P12107 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL11A1P12107 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL11A1P12107 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL11A1P12107 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.94■□□□□ 0.3
COL11A1P12107 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL11A1P12107 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL11A1P12107 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COL11A1P12107 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.94■□□□□ 0.3
COL11A1P12107 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.94■□□□□ 0.3
COL11A1P12107 MAGEA5-201ENST00000446757 942 ntBASIC16.94■□□□□ 0.3
COL11A1P12107 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.94■□□□□ 0.3
COL11A1P12107 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
COL11A1P12107 AC026803.1-201ENST00000569130 274 ntBASIC16.94■□□□□ 0.3
COL11A1P12107 MIR5572-201ENST00000583188 137 ntBASIC16.94■□□□□ 0.3
COL11A1P12107 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
COL11A1P12107 AC008825.2-201ENST00000603374 718 ntBASIC16.94■□□□□ 0.3
COL11A1P12107 NAP1L6-202ENST00000641404 1222 ntBASIC16.94■□□□□ 0.3
COL11A1P12107 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL11A1P12107 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL11A1P12107 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL11A1P12107 TBC1D3J-201ENST00000620719 1426 ntBASIC16.94■□□□□ 0.3
COL11A1P12107 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL11A1P12107 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL11A1P12107 AC138035.3-201ENST00000622706 2791 ntBASIC16.94■□□□□ 0.3
COL11A1P12107 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.94■□□□□ 0.3
COL11A1P12107 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.94■□□□□ 0.3
COL11A1P12107 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.94■□□□□ 0.3
COL11A1P12107 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COL11A1P12107 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.94■□□□□ 0.3
COL11A1P12107 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL11A1P12107 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COL11A1P12107 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.93■□□□□ 0.3
COL11A1P12107 ST13P19-201ENST00000442505 1124 ntBASIC16.93■□□□□ 0.3
COL11A1P12107 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.93■□□□□ 0.3
COL11A1P12107 FGFR3P1-201ENST00000449999 601 ntBASIC16.93■□□□□ 0.3
COL11A1P12107 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.93■□□□□ 0.3
COL11A1P12107 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COL11A1P12107 MIR4754-201ENST00000582477 89 ntBASIC16.93■□□□□ 0.3
COL11A1P12107 AC138894.2-201ENST00000602838 371 ntBASIC16.93■□□□□ 0.3
COL11A1P12107 AL022334.2-201ENST00000610000 484 ntBASIC16.93■□□□□ 0.3
COL11A1P12107 AC007718.1-201ENST00000621078 280 ntBASIC16.93■□□□□ 0.3
COL11A1P12107 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL11A1P12107 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL11A1P12107 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.93■□□□□ 0.3
COL11A1P12107 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL11A1P12107 CICP23-201ENST00000605013 2741 ntBASIC16.93■□□□□ 0.3
COL11A1P12107 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL11A1P12107 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL11A1P12107 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
COL11A1P12107 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL11A1P12107 AC091951.1-201ENST00000512854 2465 ntBASIC16.93■□□□□ 0.3
COL11A1P12107 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
COL11A1P12107 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COL11A1P12107 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL11A1P12107 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL11A1P12107 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL11A1P12107 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL11A1P12107 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.93■□□□□ 0.3
COL11A1P12107 SCARNA21-201ENST00000517026 139 ntBASIC16.93■□□□□ 0.3
COL11A1P12107 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.93■□□□□ 0.3
COL11A1P12107 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL11A1P12107 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.93■□□□□ 0.3
COL11A1P12107 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.93■□□□□ 0.3
COL11A1P12107 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.93■□□□□ 0.3
COL11A1P12107 AC027601.3-201ENST00000622907 509 ntBASIC16.93■□□□□ 0.3
COL11A1P12107 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.93■□□□□ 0.3
COL11A1P12107 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
COL11A1P12107 AC144522.1-201ENST00000625111 1658 ntBASIC16.93■□□□□ 0.3
COL11A1P12107 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.93■□□□□ 0.3
COL11A1P12107 AC013268.4-201ENST00000637413 2228 ntBASIC16.93■□□□□ 0.3
COL11A1P12107 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
COL11A1P12107 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.93■□□□□ 0.3
COL11A1P12107 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL11A1P12107 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL11A1P12107 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
COL11A1P12107 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL11A1P12107 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL11A1P12107 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL11A1P12107 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.92■□□□□ 0.3
COL11A1P12107 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL11A1P12107 KRT8P28-201ENST00000433288 1390 ntBASIC16.92■□□□□ 0.3
COL11A1P12107 OR2K2-202ENST00000374428 1038 ntBASIC16.92■□□□□ 0.3
COL11A1P12107 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL11A1P12107 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL11A1P12107 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.92■□□□□ 0.3
COL11A1P12107 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.92■□□□□ 0.3
COL11A1P12107 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.92■□□□□ 0.3
COL11A1P12107 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms