Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM1P09493 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM1P09493 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM1P09493 AC117489.1-201ENST00000625169 3217 ntBASIC16.91■□□□□ 0.3
TPM1P09493 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TPM1P09493 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM1P09493 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM1P09493 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TPM1P09493 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.91■□□□□ 0.3
TPM1P09493 AC009078.2-202ENST00000463353 338 ntBASIC16.91■□□□□ 0.3
TPM1P09493 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.91■□□□□ 0.3
TPM1P09493 KRT8P48-201ENST00000515599 1220 ntBASIC16.91■□□□□ 0.3
TPM1P09493 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 SLC25A39P2-201ENST00000537614 270 ntBASIC16.91■□□□□ 0.3
TPM1P09493 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.91■□□□□ 0.3
TPM1P09493 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.91■□□□□ 0.3
TPM1P09493 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.91■□□□□ 0.3
TPM1P09493 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.91■□□□□ 0.3
TPM1P09493 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
TPM1P09493 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.91■□□□□ 0.3
TPM1P09493 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TPM1P09493 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
TPM1P09493 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TPM1P09493 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM1P09493 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM1P09493 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TPM1P09493 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPM1P09493 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.91■□□□□ 0.3
TPM1P09493 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM1P09493 HSPA7-201ENST00000445535 1927 ntBASIC16.9■□□□□ 0.3
TPM1P09493 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
TPM1P09493 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM1P09493 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM1P09493 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC16.9■□□□□ 0.3
TPM1P09493 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TPM1P09493 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TPM1P09493 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TPM1P09493 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.9■□□□□ 0.3
TPM1P09493 TPM4P1-201ENST00000436100 807 ntBASIC16.9■□□□□ 0.3
TPM1P09493 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM1P09493 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
TPM1P09493 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
TPM1P09493 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.9■□□□□ 0.3
TPM1P09493 FAM197Y3-203ENST00000618346 717 ntBASIC16.9■□□□□ 0.3
TPM1P09493 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM1P09493 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
TPM1P09493 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 AC012508.2-201ENST00000567613 1472 ntBASIC16.9■□□□□ 0.3
TPM1P09493 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TPM1P09493 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.9■□□□□ 0.3
TPM1P09493 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM1P09493 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
TPM1P09493 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 IL9RP2-201ENST00000423948 1312 ntBASIC16.9■□□□□ 0.3
TPM1P09493 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.9■□□□□ 0.3
TPM1P09493 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM1P09493 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TPM1P09493 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 AP000845.1-201ENST00000581677 2131 ntBASIC16.9■□□□□ 0.3
TPM1P09493 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM1P09493 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
TPM1P09493 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
TPM1P09493 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms