Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CAPN1P07384 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPN1P07384 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CAPN1P07384 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.12■□□□□ 0.01
CAPN1P07384 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
CAPN1P07384 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CAPN1P07384 AC074338.1-201ENST00000416825 156 ntBASIC15.12■□□□□ 0.01
CAPN1P07384 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPN1P07384 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.12■□□□□ 0.01
CAPN1P07384 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN1P07384 AC244107.1-201ENST00000442033 332 ntBASIC15.12■□□□□ 0.01
CAPN1P07384 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPN1P07384 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN1P07384 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN1P07384 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPN1P07384 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.12■□□□□ 0.01
CAPN1P07384 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN1P07384 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.12■□□□□ 0.01
CAPN1P07384 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN1P07384 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CAPN1P07384 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CAPN1P07384 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 AC104581.4-201ENST00000623126 3052 ntBASIC15.12■□□□□ 0.01
CAPN1P07384 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN1P07384 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN1P07384 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN1P07384 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CAPN1P07384 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPN1P07384 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CAPN1P07384 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN1P07384 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN1P07384 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 GK-202ENST00000378941 458 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPN1P07384 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPN1P07384 AC087499.6-201ENST00000411576 835 ntBASIC15.11■□□□□ 0.01
CAPN1P07384 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.11■□□□□ 0.01
CAPN1P07384 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPN1P07384 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPN1P07384 AC023310.3-201ENST00000557027 670 ntBASIC15.11■□□□□ 0.01
CAPN1P07384 AC100756.1-201ENST00000562736 682 ntBASIC15.11■□□□□ 0.01
CAPN1P07384 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPN1P07384 AC138749.3-201ENST00000567691 622 ntBASIC15.11■□□□□ 0.01
CAPN1P07384 AC092337.1-201ENST00000568699 1129 ntBASIC15.11■□□□□ 0.01
CAPN1P07384 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPN1P07384 AC116165.1-201ENST00000611806 668 ntBASIC15.11■□□□□ 0.01
CAPN1P07384 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPN1P07384 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CAPN1P07384 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPN1P07384 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN1P07384 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN1P07384 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPN1P07384 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 AC013726.1-201ENST00000563747 2285 ntBASIC15.11■□□□□ 0.01
CAPN1P07384 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CAPN1P07384 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN1P07384 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 ZBED1P1-201ENST00000502364 1930 ntBASIC15.11■□□□□ 0.01
CAPN1P07384 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CAPN1P07384 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
CAPN1P07384 MROH4P-201ENST00000431302 1578 ntBASIC15.11■□□□□ 0.01
CAPN1P07384 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN1P07384 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CAPN1P07384 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN1P07384 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms