Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC18.36■□□□□ 0.53
APPP05067 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.36■□□□□ 0.53
APPP05067 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.36■□□□□ 0.53
APPP05067 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
APPP05067 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.36■□□□□ 0.53
APPP05067 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 BAATP1-201ENST00000412284 1225 ntBASIC18.36■□□□□ 0.53
APPP05067 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.36■□□□□ 0.53
APPP05067 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.36■□□□□ 0.53
APPP05067 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.36■□□□□ 0.53
APPP05067 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.36■□□□□ 0.53
APPP05067 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.36■□□□□ 0.53
APPP05067 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 AC068587.3-201ENST00000526613 355 ntBASIC18.36■□□□□ 0.53
APPP05067 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.36■□□□□ 0.53
APPP05067 AL158070.2-201ENST00000623713 1621 ntBASIC18.36■□□□□ 0.53
APPP05067 AC013268.4-201ENST00000637413 2228 ntBASIC18.36■□□□□ 0.53
APPP05067 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
APPP05067 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.36■□□□□ 0.53
APPP05067 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APPP05067 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.35■□□□□ 0.53
APPP05067 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APPP05067 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.35■□□□□ 0.53
APPP05067 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.35■□□□□ 0.53
APPP05067 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
APPP05067 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APPP05067 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.35■□□□□ 0.53
APPP05067 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APPP05067 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
APPP05067 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APPP05067 ACKR1-201ENST00000368121 1240 ntBASIC18.35■□□□□ 0.53
APPP05067 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APPP05067 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APPP05067 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APPP05067 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.35■□□□□ 0.53
APPP05067 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.35■□□□□ 0.53
APPP05067 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.35■□□□□ 0.53
APPP05067 BCRP2-202ENST00000447763 634 ntBASIC18.35■□□□□ 0.53
APPP05067 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.35■□□□□ 0.53
APPP05067 BCRP6-201ENST00000510112 632 ntBASIC18.35■□□□□ 0.53
APPP05067 BCRP7-201ENST00000511549 544 ntBASIC18.35■□□□□ 0.53
APPP05067 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.35■□□□□ 0.53
APPP05067 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.35■□□□□ 0.53
APPP05067 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.35■□□□□ 0.53
APPP05067 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APPP05067 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.35■□□□□ 0.53
APPP05067 BTNL10-201ENST00000595971 695 ntBASIC18.35■□□□□ 0.53
APPP05067 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.35■□□□□ 0.53
APPP05067 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.35■□□□□ 0.53
APPP05067 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APPP05067 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.35■□□□□ 0.53
APPP05067 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
APPP05067 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APPP05067 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APPP05067 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APPP05067 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APPP05067 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APPP05067 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
APPP05067 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.35■□□□□ 0.53
APPP05067 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
APPP05067 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC18.35■□□□□ 0.53
APPP05067 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.34■□□□□ 0.53
APPP05067 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.34■□□□□ 0.53
APPP05067 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
APPP05067 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
APPP05067 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
APPP05067 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 KRT8P44-201ENST00000441609 1350 ntBASIC18.34■□□□□ 0.53
APPP05067 AC093525.8-201ENST00000624099 1342 ntBASIC18.34■□□□□ 0.53
APPP05067 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
APPP05067 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.34■□□□□ 0.53
APPP05067 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.34■□□□□ 0.53
APPP05067 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.34■□□□□ 0.53
APPP05067 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
APPP05067 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APPP05067 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.34■□□□□ 0.53
APPP05067 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms