Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LMNAP02545 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.06■□□□□ 0.16
LMNAP02545 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LMNAP02545 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.06■□□□□ 0.16
LMNAP02545 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.06■□□□□ 0.16
LMNAP02545 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.06■□□□□ 0.16
LMNAP02545 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
LMNAP02545 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.06■□□□□ 0.16
LMNAP02545 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LMNAP02545 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.06■□□□□ 0.16
LMNAP02545 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.06■□□□□ 0.16
LMNAP02545 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.06■□□□□ 0.16
LMNAP02545 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LMNAP02545 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.06■□□□□ 0.16
LMNAP02545 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.06■□□□□ 0.16
LMNAP02545 AC068587.3-201ENST00000526613 355 ntBASIC16.06■□□□□ 0.16
LMNAP02545 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.06■□□□□ 0.16
LMNAP02545 AC036164.1-201ENST00000570544 333 ntBASIC16.06■□□□□ 0.16
LMNAP02545 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.06■□□□□ 0.16
LMNAP02545 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.06■□□□□ 0.16
LMNAP02545 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.06■□□□□ 0.16
LMNAP02545 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.06■□□□□ 0.16
LMNAP02545 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LMNAP02545 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LMNAP02545 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LMNAP02545 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.06■□□□□ 0.16
LMNAP02545 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.06■□□□□ 0.16
LMNAP02545 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.05■□□□□ 0.16
LMNAP02545 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.05■□□□□ 0.16
LMNAP02545 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.05■□□□□ 0.16
LMNAP02545 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.05■□□□□ 0.16
LMNAP02545 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LMNAP02545 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 AL662890.1-201ENST00000396818 632 ntBASIC16.05■□□□□ 0.16
LMNAP02545 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
LMNAP02545 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LMNAP02545 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.05■□□□□ 0.16
LMNAP02545 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LMNAP02545 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.05■□□□□ 0.16
LMNAP02545 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.05■□□□□ 0.16
LMNAP02545 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.05■□□□□ 0.16
LMNAP02545 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.05■□□□□ 0.16
LMNAP02545 AP001889.1-201ENST00000525414 633 ntBASIC16.05■□□□□ 0.16
LMNAP02545 DUX4L45-201ENST00000566406 1057 ntBASIC16.05■□□□□ 0.16
LMNAP02545 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.05■□□□□ 0.16
LMNAP02545 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
LMNAP02545 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.05■□□□□ 0.16
LMNAP02545 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LMNAP02545 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LMNAP02545 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LMNAP02545 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.05■□□□□ 0.16
LMNAP02545 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.05■□□□□ 0.16
LMNAP02545 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LMNAP02545 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LMNAP02545 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms