Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AL807761.2-201ENST00000422849 729 ntBASIC16.21■□□□□ 0.19
TIMP1P01033 AL645933.1-201ENST00000440087 609 ntBASIC16.21■□□□□ 0.19
TIMP1P01033 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 RPSAP15-201ENST00000448168 861 ntBASIC16.21■□□□□ 0.19
TIMP1P01033 AL035414.1-201ENST00000451327 857 ntBASIC16.21■□□□□ 0.19
TIMP1P01033 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.21■□□□□ 0.19
TIMP1P01033 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TIMP1P01033 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.21■□□□□ 0.19
TIMP1P01033 BX088702.1-201ENST00000610784 235 ntBASIC16.21■□□□□ 0.19
TIMP1P01033 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TIMP1P01033 AC133540.1-201ENST00000620845 1019 ntBASIC16.21■□□□□ 0.19
TIMP1P01033 AC025262.2-201ENST00000623975 1056 ntBASIC16.21■□□□□ 0.19
TIMP1P01033 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.21■□□□□ 0.19
TIMP1P01033 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.21■□□□□ 0.19
TIMP1P01033 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.21■□□□□ 0.19
TIMP1P01033 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TIMP1P01033 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TIMP1P01033 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.21■□□□□ 0.19
TIMP1P01033 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TIMP1P01033 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.21■□□□□ 0.19
TIMP1P01033 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TIMP1P01033 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TIMP1P01033 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
TIMP1P01033 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TIMP1P01033 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TIMP1P01033 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.21■□□□□ 0.18
TIMP1P01033 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TIMP1P01033 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TIMP1P01033 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TIMP1P01033 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.2■□□□□ 0.18
TIMP1P01033 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.2■□□□□ 0.18
TIMP1P01033 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.2■□□□□ 0.18
TIMP1P01033 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.2■□□□□ 0.18
TIMP1P01033 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.2■□□□□ 0.18
TIMP1P01033 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.2■□□□□ 0.18
TIMP1P01033 ALG1L6P-201ENST00000515248 758 ntBASIC16.2■□□□□ 0.18
TIMP1P01033 C2orf69P1-201ENST00000563532 1093 ntBASIC16.2■□□□□ 0.18
TIMP1P01033 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 AC107464.3-201ENST00000609172 737 ntBASIC16.2■□□□□ 0.18
TIMP1P01033 AC009560.1-201ENST00000620208 434 ntBASIC16.2■□□□□ 0.18
TIMP1P01033 AC073911.3-201ENST00000624401 631 ntBASIC16.2■□□□□ 0.18
TIMP1P01033 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 AP003680.1-201ENST00000598970 3660 ntBASIC16.2■□□□□ 0.18
TIMP1P01033 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.2■□□□□ 0.18
TIMP1P01033 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.2■□□□□ 0.18
TIMP1P01033 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TIMP1P01033 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TIMP1P01033 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 REXO1L4P-201ENST00000605109 1937 ntBASIC16.19■□□□□ 0.18
TIMP1P01033 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 PCDHA12-202ENST00000613593 2588 ntBASIC16.19■□□□□ 0.18
TIMP1P01033 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TIMP1P01033 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TIMP1P01033 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TIMP1P01033 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TIMP1P01033 AC012508.2-201ENST00000567613 1472 ntBASIC16.19■□□□□ 0.18
TIMP1P01033 AC003102.2-201ENST00000589195 1469 ntBASIC16.19■□□□□ 0.18
TIMP1P01033 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TIMP1P01033 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.19■□□□□ 0.18
TIMP1P01033 HIST2H2BA-201ENST00000412169 381 ntBASIC16.19■□□□□ 0.18
TIMP1P01033 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.19■□□□□ 0.18
TIMP1P01033 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.19■□□□□ 0.18
TIMP1P01033 TLE1P1-201ENST00000422965 589 ntBASIC16.19■□□□□ 0.18
TIMP1P01033 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.19■□□□□ 0.18
TIMP1P01033 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.19■□□□□ 0.18
TIMP1P01033 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.19■□□□□ 0.18
TIMP1P01033 RN7SL81P-201ENST00000493781 261 ntBASIC16.19■□□□□ 0.18
TIMP1P01033 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms